LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo11g01342	ATGGAGACTGAGGATCTAACCGACGACCTCCATAGCCTCAGCTTCGCTTCCACCACCACCACCACCGCAGACATCAAACGCAGCACAAGCTTCAGCTCCTCAACCAACACCACCGTAACCCCCTCAACCTCCTCCCACTTCAACGCCGCCAAGCCCCACGCGCCCTCCTCCGACCCCTGCTCCTCCTTCGTCCACCGCCCCCGCCCCCTCCCCCTCGCCCTCTCCGACCTCCGCTTCACGCGCCGCCTCGGCTCCGGTGACATGAGCGCCGTCTACCTCGCCGAGCCCAAGGAGGGCGGCGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCCAGGAGGAACAAGGAAGGGAGGGCCAGGACTGAGAGGGAAATTCTGGAAATGTTGGATCATCCCTTCTTGCCCACGCTCTACGCCTCCATCCACGCGCCTAAGTGGCTCTGTTTCTTAACGCCGTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGCCAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGATTCTATGCATCAGAAGTTTTGTTGGCACTTGAATACCTACACATGTTGGGGGTAATCTACCGCGACCTCAAGCCCGAAAACGTGTTAATTCGATCAGACGGCCACATCATGCTCACAGATTTCGACCTCTCCTTAAAATGCGACGATTCCACATCAACGGCTCAAATCATCTCCAATCAAAAGCCTGCCCCCACCGTCCCACGCAACGATTCCCACGTTGAACCCGCTCGCGCCACCTCTTCTTCATGCATAATCCCCAACTGCATAGTCCCCACCGCATCATGCTTCCACCCTAAACGCAAGCGAAAGAAGAAACAAACCCTTTTTAATGGGCCTGCGTTCGTGGCCGAGCCCATTAACGCTCGGTCCATGTCATTCGTCGGGACCCACGAGTACTTGGCGCCCGAGATCGTGTCCGGGGAGGGCCACGGTAGCGCCGTGGACTGGTGGACTCTGGGGATATTTATGTTCGAACTGTTTTATGGCGTCACGCCCTTCAAGGGCATGGACCACGAGCTAACCCTCGCGAACATTGTGGCTCGAGCCCTCGAGTTCCCGAAGGAACCCGCGGCTTCGGCTGCCATGAAAGACCTCATCTCGCAGCTGCTGGCTAAGGACCCGGCTAAGCGACTAGGGTCCGTGATGGGGGCTTCCGCGATCAAACACCACTCGTTTTTTCAAGGCGTGAATTGGGCGTTGCTGAGGTGTGCCACTCCACCCTTTGTACCCCCACCTAGTGGGAAAGCTGTATATGATGATCATGAAAGTTGTCCAGAGATTTTCATTGACTGTTATTAA	1341	0.5757	METEDLTDDLHSLSFASTTTTTADIKRSTSFSSSTNTTVTPSTSSHFNAAKPHAPSSDPCSSFVHRPRPLPLALSDLRFTRRLGSGDMSAVYLAEPKEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGVIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISNQKPAPTVPRNDSHVEPARATSSSCIIPNCIVPTASCFHPKRKRKKKQTLFNGPAFVAEPINARSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPAASAAMKDLISQLLAKDPAKRLGSVMGASAIKHHSFFQGVNWALLRCATPPFVPPPSGKAVYDDHESCPEIFIDCY	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo11g01342	446	SUPERFAMILY	Protein kinase-like (PK-like)	55	435	IPR011009	-
	Pumo11g01342	446	Pfam	Protein kinase domain	80	252	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo11g01342	446	Pfam	Protein kinase domain	304	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo11g01342	446	ProSiteProfiles	Protein kinase domain profile.	77	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo11g01342	446	FunFam	serine/threonine-protein kinase D6PKL2	76	161	-	-
	Pumo11g01342	446	ProSitePatterns	Protein kinases ATP-binding region signature.	83	107	IPR017441	GO:0005524
	Pumo11g01342	446	PANTHER	FLIPPASE KINASE 1-RELATED	25	426	-	-
	Pumo11g01342	446	MobiDBLite	consensus disorder prediction	29	62	-	-
	Pumo11g01342	446	Gene3D	Phosphorylase Kinase; domain 1	76	161	-	-
	Pumo11g01342	446	SMART	serkin_6	77	407	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo11g01342	446	FunFam	serine/threonine-protein kinase D6PK-like	162	229	-	-
	Pumo11g01342	446	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	199	211	IPR008271	GO:0004672\|GO:0006468
	Pumo11g01342	446	Gene3D	Transferase(Phosphotransferase) domain 1	162	249	-	-
	Pumo11g01342	446	Gene3D	Transferase(Phosphotransferase) domain 1	302	425	-	-
	Pumo11g01342	446	FunFam	serine/threonine-protein kinase D6PK-like	302	425	-	-
	Pumo11g01342	446	MobiDBLite	consensus disorder prediction	29	51	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo11g01342	Pumo-Chr11	43395737	43399399	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo11g01342	4	446	AGC Kinase Gene Family	AT3G44610	63.676	0.0	535

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Pumo11g01342		Pkinase	2.4e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo11g01342	K08286		-	gmx:100792154	747.658