Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01341 ATGAGCGGCGATGGTCGGAGACGTTACTGGAGAGACACCAGGGCGTCGAAGAAGAAGCGGAAGCTGAACCGCTCCGCCGAGGAAGAGCGCGATCTTTTCTCGGAGGGCGAAAAATCTATGAATGGGAACGAGCATTCAATAAAGCATAATGATTCAAATCGTGTGATGGATGATGAGATTGTTAATGAGTTGGAGGACTTTGGAAGCAAGGGGAGGAGTTCTACATGCAGATCTAGACCAATTATACCGCATTATGAAGCTAATAATGAACGGCATTCAGTGAAGCTCAATGATGAAGAAGATTTGGAGCAACAGCATAGTAATGATAATAGCAGCAAGGATCAGATGCTTTCACCGTTACAACAAAATGAAATATGTGAAAATGTTGACAGAAATGTAGATTATCAAGGATGGCTTCAAATAAAGAAGCGAACGTGGAAAGATAGTCTGGAGAGGAGAAAGAAGCGGAGATTGGAGAATTCAAAGAAATTTGACCGTTTAAATGGTGTTCTTGAACAAATTAATGGTAAGGGGAGTCAGGGCAGAAGTAATATCAGTTCATATCTTAAAAGGCGTGAGGAAGACTTAACAAAGTTCCACTGGCAGATAATACAGCTGGTTCCCAGTTCACTCATAGGCCAATTTTTTGCTTGGGTTGTTGTTAATGGGAGTATGCATAAGATTTCTGTTTCTGTTCCTAGAGTCTTTTACATCAATTCAAGATCATCAATTACTGAAGAATTTATGGGTAAACGTGTCAGCAAGACTCTTCCTCATGGAAAGCATAATTATAACCTGTGCGAGGTCTCAATTAGTGAAATTCAATATAGGAAAACAAGCAAAAAACTTGCAGCTCTTCTAGCAAATCCTGATGTTGAGGGAATATATGAAACGAAGGTGCCACTGGAGTTTAAGGCAATAGTCCAGCTTGGCTGCGTTTGTAAGGTGGACAAAACTGCTAATAAACGTAGACTATCAGAACCTTGGAATTTGAGTGAATTGCACATGAAGACCACAACAGAATGTGCTTATCTCAAACAATCTATATCCTTCTTTTACTTTTACCATAGCGTCTCTGAGGGAAGAGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATAACTGTTGTGGTAGTTAATCCCTATCAAAACAAAGATTTATCACCGACTTTTCTTGAAAGACAATTTCATGATGCTTGTCAAGCTTTGCCTACTGAGCCATCTTTGAGGAATGACATTAATATTAAGATGGACTATGTTGCAAATATCAAGGATGCTGAAACATTGATGCAAAGAACAATACATGGTCACAGTCATGGGAGGGAAAACCATGTGCCTATGGCTGCTGTCATTGAATGCCCAAATGTTCAACTAGTAAAACTGGGGATCCGAGCTCTGGATGATTTTCCATGCCTGAGTATTCCTTACAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCTAAAATTGGAATGCAACGTTGTGCTGCATCAGTCCAGTGGCTAAATAAGAGAATTGCTCTCTCAAGATATGCCCATGTACCGCTGGGAAATTTTAAACTTGACTCGCTTATATTTACAGCTGATGTTTTCTTTTCAAGAGCGTTGCATGATAATCAACAGGTACTTTGGATATCTGATGACGGTTTTCCAGATTTAGGTGGCATTGATGGCGAACAGAACTGTTTTGTCGACGAGGTCCTCCAACCTGTTCTTATTTATCCTGGAGCTTATAGAAAAGTTACTGTGGAGCTAAAGATACACCACCTGGCTATAAATGCTCTTCTCAAATACAACCTACTTAATGAAATGGAAGGAGGCACTCTATTAGGACTTGATCGTGAATTTGATTCTGGAGCATTTTGCACTAATGATCAGAATGGTTTTGATGTGTCTACCTCATGTGCACAAGCCTTTCGAGTCCTTAGACAGTTGATCCAAAGGTGCCTAGCAGATGCAGTTACATGGAGAAATGTTCATGCTGATGCAATATTGCATCATCTATATAGATGGCTTCGCAGCCCTGAATCAAAACTTCATGATCCAGCTCTCCTCCAGCTACTTCACAAGGTCATGCAAAAGGTCTTCGCATTGTTGTTGGCTGAGTTCCGCAAGTTAGGTGCTACAATTGTATTTGCGAACTTCTCAAAAATTATCATAGACACCGGGAAATATGAACTGTCTAGAGCCAAAGCTTATTGTGACAGTTTGTTAAGAATTATACAGTCTACGGTCAACCTATTTGAATGGATTCAGCTTGAACCACTGCAGTTCTGGTGCTCATTGCTATTCATGGATCAGTATAACTATGGTGGAATACCAGCAAAATCTGATGAAGCCATGAATGATAAATCTCAAGTAGACATTATATCAAGTTGGAATATTGCTGAATACTTGCCCAAAAAAATTCAAGATCATTTTGTTTTCATTGTTTCTCAATTCATGTATATTCCCTGGAATAATTATGCACAAAAACAAGCACAAATCAAGGCCTCATTGCAGAATGGTGACTCTTGTACCCCATCAATTAACATTGGAGCTGCAAAGGCTCTTGAATCAGAAACAGTGGAATATGTCAAAGGGCAGATTAGCTCTTACTTCACAGACAAACTACTAGGAATTGTTCATGATATTGGTCTTGATATGAAGAGTATGAGCAGATCAGAAAACAACCAAAGTATATCATCAGGCCATAGAGAGGATGCTGCCTTGGAATTTATCAAGCATGTCTCTGCTGTTCTGGCCCTTGACCAAAGTGTGCAGCACGAAGTTTTGGTCTTGAGAAAGAATTTGCTCAAATATGTTAATGTCAGGGAGTTTGCTCCAGAAGCTAAGTTTGACAATGCTTGTCATTCCTTCATCTTACCCAATGTCATTTGCAGCTATTGTAATAACTACAGAGACTTGGACTTGTGTCGTGACTCGGCTTTATTAACTGAGGAGGAGTGGTATTGTGCGGTGCCACAATGTGGCCAACCTTATGACCGTGAGGTGATGGAAAATGCTCTTCTTCAGATTGTAAGACAAAGAGAACGACTATACCACCTGCAAGATCTGGTGTGTATCAAGTGTCATCAAGTGAAAGCTTCACATTTGGCTGAGCAATGTGCATGTGGAGGCTCATTTAAATGCAAGGAAGATGCAAGTGAATTTTCTGAAAAGATGAAGGTTATATTAAACATAGCTTCTCGTCAGAAATTCCAACTTCTCCAAGAATGTACATCTTGGATTTTAGAACTTAGATAG 3264 0.3986 MSGDGRRRYWRDTRASKKKRKLNRSAEEERDLFSEGEKSMNGNEHSIKHNDSNRVMDDEIVNELEDFGSKGRSSTCRSRPIIPHYEANNERHSVKLNDEEDLEQQHSNDNSSKDQMLSPLQQNEICENVDRNVDYQGWLQIKKRTWKDSLERRKKRRLENSKKFDRLNGVLEQINGKGSQGRSNISSYLKRREEDLTKFHWQIIQLVPSSLIGQFFAWVVVNGSMHKISVSVPRVFYINSRSSITEEFMGKRVSKTLPHGKHNYNLCEVSISEIQYRKTSKKLAALLANPDVEGIYETKVPLEFKAIVQLGCVCKVDKTANKRRLSEPWNLSELHMKTTTECAYLKQSISFFYFYHSVSEGRAIYVGYFPASKAITVVVVNPYQNKDLSPTFLERQFHDACQALPTEPSLRNDINIKMDYVANIKDAETLMQRTIHGHSHGRENHVPMAAVIECPNVQLVKLGIRALDDFPCLSIPYNARDSQYQILGWQQVAAKIGMQRCAASVQWLNKRIALSRYAHVPLGNFKLDSLIFTADVFFSRALHDNQQVLWISDDGFPDLGGIDGEQNCFVDEVLQPVLIYPGAYRKVTVELKIHHLAINALLKYNLLNEMEGGTLLGLDREFDSGAFCTNDQNGFDVSTSCAQAFRVLRQLIQRCLADAVTWRNVHADAILHHLYRWLRSPESKLHDPALLQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYELSRAKAYCDSLLRIIQSTVNLFEWIQLEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDKSQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNNYAQKQAQIKASLQNGDSCTPSINIGAAKALESETVEYVKGQISSYFTDKLLGIVHDIGLDMKSMSRSENNQSISSGHREDAALEFIKHVSAVLALDQSVQHEVLVLRKNLLKYVNVREFAPEAKFDNACHSFILPNVICSYCNNYRDLDLCRDSALLTEEEWYCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIKCHQVKASHLAEQCACGGSFKCKEDASEFSEKMKVILNIASRQKFQLLQECTSWILELR 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01341 1087 SMART DUF1744_2 392 779 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pumo11g01341 1087 Pfam Domain of unknown function (DUF1744) 409 779 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pumo11g01341 1087 MobiDBLite consensus disorder prediction 21 72 - -
Pumo11g01341 1087 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 32 1085 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Pumo11g01341 1087 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01341 Pumo-Chr11 43380416 43391417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01341 6 1084 Core DNA Replication Machinery Family AT2G27120 49.490 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01341 K02324 - gmx:100778115 1756.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01341 11 43380416 43391417 Pumo11g01341 11 43380416 43391417 ECH