Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01272 ATGTCTTCCAATAAGAAAAGTATTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAAGCCTCTGAAGTACACGAGCCAACCCCAAAACACAAAACCTCCCACATTCACCAAAAAGCAAACAACAACCTTAGCAGCATGGCTTCTTCCACCACTTCCTTGGAAGAAGAGTTCACTTCCACCACAATATCCGAATCCGAGACATTTCATGATCACAACAACAACAACAATAACAACAACAACGTTTTACTGAAACGAAGCCCCCTCGTGGATAGCGTGGCGATTGAGAAGGACTCGTCGAATCCATATCATGATTTCAGACACTCCATGCTTCAAATGATCTTTGAGAAGGAGATCGAGTCAGAGGACGATCTTCAAGACCTTCTGCAATGCTTTCTTCACCTGAATGCGCCATGTCATCACCACGTCATCGTTAAGGCCTTCAATGAGATCTGCAAAGAAGCGTTTCCTAACAAGGTTAGTACCACCCCTGCTGCGTCTGAACCATCTCCCTCTCGCAGGAGCCCACTCATCGTTCGAAAGAGGCCGGTGAACGTGGCAATACCACTGATTGTTTGTGTTTACACAAAGTATTGTTTCATGGCAATGGATGCTTTGCTAGCTAGCTAA 645 0.4543 MSSNKKSILRTVFTANGSCGCSKTKASEVHEPTPKHKTSHIHQKANNNLSSMASSTTSLEEEFTSTTISESETFHDHNNNNNNNNNVLLKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCHHHVIVKAFNEICKEAFPNKVSTTPAASEPSPSRRSPLIVRKRPVNVAIPLIVCVYTKYCFMAMDALLAS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01272 214 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 160 IPR038933 GO:0045892
Pumo11g01272 214 Pfam Transcriptional repressor, ovate 104 159 IPR006458 -
Pumo11g01272 214 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Pumo11g01272 214 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pumo11g01272 214 NCBIfam uncharacterized plant-specific domain TIGR01568 98 157 IPR006458 -
Pumo11g01272 214 MobiDBLite consensus disorder prediction 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01272 Pumo-Chr11 42334767 42335686 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo11g01272 Ovate 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01272 - - gmx:102660065 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03724 4 77016746 77017504 Pumo11g01272 11 42334767 42335686 PCT