Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01257 ATGGAATACCTTCATGGTCTTGCCCGCCAAACCTTTATCCATCGAGACCTAAAGTCTTCTAATATTCTACTAGGGGATGATTTTCGCGCAAAAGTTTCTGATTTTGGTCTGGTGAAACTTGCCCCGGATGGCGAGAAGTCTGTGGCAACAAAGCTTGCTGGAACATTTGGTTACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGACGTTTTCAGCTACGGTGTGGTCTTGATGGAACTTTTGACTGGACTAATGGCTCTTGATGAGAGCCGGTCGGAGGAAAGCCGGTACTTAGCCGAATGGTTTTGGCAAATTAAATCGAGCAAAGAAACGCTTATGGCTGCCATTGATCCAGCTCTTGAAGCAAGTGAAGAGACTTTTGAGAGCATTTCCATTGTGGCTGAACTCGCTGGACACTGCACTTCCAGGGATGCAAGTCATAGGCCTGATATGAGCCATGCAGTTGGCGTGCTATCTGCATTAGTGGAGAAATGGCGACCGATTGATGAAGAATTTGAGTATGGCTCTGGCATTGACTTCAGTCAACCACTTCCCCAGTTGCTGAAAGTTTGGAAGGAATCAGAAGGCAAAGAATCAAGCTATACAAGTGAACACAGTGAAGGAAGCATACCAGCTAGGCCTACTGGTTTTGCAGACTCTTTTACTTCTGCTGATGCAAGATGA 699 0.4592 MEYLHGLARQTFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRSEESRYLAEWFWQIKSSKETLMAAIDPALEASEETFESISIVAELAGHCTSRDASHRPDMSHAVGVLSALVEKWRPIDEEFEYGSGIDFSQPLPQLLKVWKESEGKESSYTSEHSEGSIPARPTGFADSFTSADAR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01257 232 MobiDBLite consensus disorder prediction 203 232 - -
Pumo11g01257 232 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01257 232 Pfam Protein kinase domain 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01257 232 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Pumo11g01257 232 SUPERFAMILY Protein kinase-like (PK-like) 1 163 IPR011009 -
Pumo11g01257 232 PANTHER OSJNBA0070M12.3 PROTEIN 1 232 - -
Pumo11g01257 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 12 24 IPR008271 GO:0004672|GO:0006468
Pumo11g01257 232 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01257 Pumo-Chr11 42213435 42214725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01257 1 163 Receptor kinase-like Gene Family AT5G56890 47.273 1.46e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pumo11g01257 Pkinase 2.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01257 - - gmx:100815045 447.203