Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01253 ATGGGTTTTTTGCTGAAAGAGGCTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTCTGGAAGATCGGTTGCAATAATTCCAAGCTGTTAATCTGGGAAGATTACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACCGTTGGGACGTCTAATTTTCCTTACCGAGATGGGGTAGGATGCTGGTTTTCTTCTGAGTCTCAGCTAGGGATTCAGGAGGAGGACAGAGTCTGTGTATTGATTAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATAGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATTTCACTAGAGATGCATATCCACCAGAGGTATATCCTGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACGGTGGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTAGGTTCTTTCTTGCCGATAATGGAAGATATGGGATTTGTGAATGATGTAAAGAACTGGATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAAATTTGCTGGACCTGTGACCGTTGATCCACCTGTCATTACTTCAAACTGCATTCCCTCGGTTGCTAATGGTTCCAACCAACTTACTAATTCTCCTCTTGCTTCAAGGCCTGTTGCTCAGCCACCTCATCCTCTAAGGGGAGAAATAAATAATTACCAGGGTTCTTTATTGACACCTCAAACCCATAACCCGAACCAGATATTTGATGGCACTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGTCTGTGGCCAACCAAAGAAGACACTTGTTGAGGCTGAAGCTAAAGTGATACCTGCAAATTTTGATTCATGTCTGCAACAGCATTCTGTTTATAATGCTAGATCTGCATTCAATGAGTTATCTAGTTTCAATCAATCAAATCTGAGTGACTGCAGCCTTAAATATGTGGAACAACAAACATCAGGTGTTGGGAGACAGAGTCATGTTAATCCTAACATGAATTCATCAAGTGCCTTAAATATGCCTCAACTGAAAACAGATGGAAGCAAAATTCTTAAACAGAATCAGAGTTCTAGTAGCAGTTCACTACTTGGAGGAATCCCAATATGTAGTGGAAGTAATCTTTTGAGGACAAATATGATTAACAGCTCAGTTTCAAATCCTCCCAATGTATCAACTTCTGATTTTTCTGGAGTGCACAAGATTGGGTTTGGACTTCTTCAATGTAACAATGCAACAACTAATGCTGGGCTTTGTTCTGTTGTGCCTAATTTCACTAATCAATCAGTTACCAGTCACATGAATCTAGAAGGCTCTGGTCAGAAGAATCTTCCCATTGATTTAAAGCATGCGTGTGATGCTTTCGCTTCAACTGATCAAAGGATAGATGATGATCTGCTTCAGGCTGCCCTTAAGATTCCATCTCTTCATCTTGAGGAGCATGTGCCTATGAGTGATCAAATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTGGTCAACATATGATGAAAATGAATGTTAAGCATGAAGAAGCCTATGCTCAACTTCCATCAGGTGATGACCTCTTTGATGTTTTAGGTGTGGATTTGAAAAGGAGACTGCTCAATGGAAACTGGAATAAGTTGCTTGCCACTGATTCAGATACCAACACAGAACATCTAGATAAGAAGGCAACATGCACAAATTTGCAAGGTGTAGGTCCTGATAATAGTTATTCAGTTAATGAAGCAATTTCAGACAGTGGCATCTTCTCTGGTACAGGCACTGACCACCTCTTAGATGCTGTGGTCTCAAAAGCTCAATCTGCTGCAAAACAGAATTCTGATGAAATGTCTTGCAGGACAACATTGACAACGATTAGTACCGCCTCCTTTCCCTCTCCTGCCGGCAAGCAGGTTATGTCTGATCATGTTGTCCCGAGGGGATTGTTCGATTTTCCTAAGATGGGGATTAAAACAGCTGCTGCAGAAACAAGTTCTCTGAGGTCTGGGTGTAGCAAGGATGATCCTGGAAACTGCTCTCAAACTACTTCCATATATGGTTCTAAGCTTAGTTCATGGGTTGAGAATGGTAGTAATGTGAAACGTGAAAGTAGCGTTTCAACTGGATACTCCAAGCGACCAGATGAAGTTTGCAAATCAAATCGTAAAAGACTTAAACCTGGAGAGAACCCTAGGCCTCGGCCTAAGGATCGCCAAATGATTCAAGATCGTGTGAAGGAGTTACGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGCCCTATCATTGTTGAGGATCTTAATCCTCCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGGGTCATGGAAGCTCGTAATGACAAGATCTGGGCACGTTTTGCTGTTGAGGCAAACAGGGATGTAACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACGGTGAAGGGCGGTGGTGCATCTTCATCCAATGCAATTGATAACAACATGATGGTGTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGCAGGCCTAGTAGTTTGCAATGA 2877 0.4206 MGFLLKEALRTLCSRNRWSYAVFWKIGCNNSKLLIWEDYYYEPLPSPFPPRTVGTSNFPYRDGVGCWFSSESQLGIQEEDRVCVLINKMMVNNSVSIAGEGIVGRAAFTGNYQWILLNNFTRDAYPPEVYPELHYQFSAGMQTVAVIPVLPHGVVQLGSFLPIMEDMGFVNDVKNWILQLGCVPGALLSEDYSAKVSNEKFAGPVTVDPPVITSNCIPSVANGSNQLTNSPLASRPVAQPPHPLRGEINNYQGSLLTPQTHNPNQIFDGTCQPKAHSMIKTNVCGQPKKTLVEAEAKVIPANFDSCLQQHSVYNARSAFNELSSFNQSNLSDCSLKYVEQQTSGVGRQSHVNPNMNSSSALNMPQLKTDGSKILKQNQSSSSSSLLGGIPICSGSNLLRTNMINSSVSNPPNVSTSDFSGVHKIGFGLLQCNNATTNAGLCSVVPNFTNQSVTSHMNLEGSGQKNLPIDLKHACDAFASTDQRIDDDLLQAALKIPSLHLEEHVPMSDQIPGFVQDCLNKDVTGQHMMKMNVKHEEAYAQLPSGDDLFDVLGVDLKRRLLNGNWNKLLATDSDTNTEHLDKKATCTNLQGVGPDNSYSVNEAISDSGIFSGTGTDHLLDAVVSKAQSAAKQNSDEMSCRTTLTTISTASFPSPAGKQVMSDHVVPRGLFDFPKMGIKTAAAETSSLRSGCSKDDPGNCSQTTSIYGSKLSSWVENGSNVKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGGASSSNAIDNNMMVYHSFPQATQIPATGRPSSLQ 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01253 958 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 952 IPR043561 GO:0003700|GO:0006355
Pumo11g01253 958 MobiDBLite consensus disorder prediction 716 759 - -
Pumo11g01253 958 MobiDBLite consensus disorder prediction 734 759 - -
Pumo11g01253 958 CDD bHLH_AtLHW_like 748 817 - -
Pumo11g01253 958 MobiDBLite consensus disorder prediction 716 730 - -
Pumo11g01253 958 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 744 793 IPR011598 GO:0046983
Pumo11g01253 958 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 175 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01253 Pumo-Chr11 42162130 42168992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01253 545 929 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.731 1.84e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01253 - - gmx:100812899 1735.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03715 4 76881787 76888109 Pumo11g01253 11 42162130 42168992 PCT