Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo11g01238 | ATGAATAGTTTTGTGAAATACATTTTGGGTAATGGTTTGGTTGTATTGGTGGAAATAGTCAGGGTCACAAACACACTCGTTCAGCTTGGAGCAAAGTTTCTGTTCTCCCGCCTCAACGCACAAATGAGTGATATAAGGAAGTGGTTCATGAAAACACATGACAAGGGCAACAATGCCGCTTCCTCCAAGCCTTCTTCCGATAAACCCTCGTCCGAGAAAACGGTGGCTGGAGGTCAGGAAAGTTCAGGGAGGAGGATAACTAGCAAATATTTTAATTCGAACAAGCAAAAGGGGAAAGATGAGAAAGAAACACAGGAGCTCCCTGCTAAAAGAAAGAATATGAAGGACAGCAAGGAAATACTGGAGCCTAAGAAAATTCTTGAAGATGATGAAGATGACTCTGTCTTGCCTACTAATAAAAAGAAGTTAGCTGATACCACTCCAACAAAAAAATTGAAGAGTGGATCAGGTAGGGGGATTCCCCAGAAATCTGCAGCCTTGGAAGAAAGTGACGAAGATGATGACAAAGATGCTGTGTCTGCTGCTAAATCTGGTGGAAGGGGTGGTGGTGGAAGAGCAGCACCAGGGCGATCAGCTGGTGGGAGAGGTAGAGGGGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTGACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGTGATGAAGATATTGGGGGGCGGAAGTCTGAAAAAGCCAAAGAGCTAGGAACTTCCTTCCTCACAGAGGATGGGTTGTTTGATAAGATTCGTGCCTCAAAACCTGCAAAAGCTTCTTCACAAGAGAAGAAACCTGTGAATAAGGCTGTTGCCGTAGCATCCCAGTCAAAAGTTTCTCCGAAATCACAAGTTAAGGTCCCTCTGTCCTCACGCTCACCTTCTAAGCAAGCCAAGTCGAAGACTGCTACTACTGTTCAGTCTTCTTTGATGTGGACAGAGAAATATCGACCTAAAGATCCAAAGGATATCATAGGGAATCAGTCACTTGTTTTACAGCTTCGTAATTGGTTGAAAGCTTGGAATGAGCAATTTTTGGACACTGGTAACAAAAAACAGGGAAAAAAGCAAAATGACTCTGGTTTGAAAAAAGCTGTCTTGTTAAGTGGAACCCCTGGTATAGGAAAAACAACTTCAGCAAAGTTGGTCTGTCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCCAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTAGTGGAAGCAAGACAAATTCTGTTAAGGAGCTTGTAACCAATGAGGCTATTGGGGTTAATATGGAACGGTCGAAGCATTCCAAATCTGTGCTCATTATGGATGAGGTTGATGGGATGTCAGCTGGTGATAGAGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGACCGTTACAGCCAGAAACTGAAAAGCCTAGTGAACTACTGTTTGCTTCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGCGGTTGATGGATGTTGCAAAGGCTGAAAAGCTTCAAGTTAATGAGATTGCACTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGAATGGCACTAAACCAGTTGCAGTATATGAGCCTCTCTATGTCAGTTATCAACTATGATGATGTTAGGCAGCGCTTTCTTACCAATGCGAAAGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGCTTTAATGCTGGGAAGATGAAAATGGATGAGAGGATAAATCTTAGCATGAGTGATCCTGATCTTGTTCCTCTTCTTATCCAGGAAAATTATATTAATTATAGACCAAGCTTGGCTGGTAAGGATGACAATGGCATAAAACGCATGAACCTGATTGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAGTGAATGTACAGATTCGCAGATATCGACAGTGGCAGCTCTCTCAAGCTAGTTCTCTTGCAACATGCATAATTCCTGCGTCATTGTTGCACGGGCAAAGGGAAATACTTGAACAGGGAGAACGGAATTTCAACCGGTTTGGTGGGTGGCTGGGGAAGAACTCAACAATGGGAAAAAACTTGAGGCTTTTGGATGATCTTCACGTTCACATTCTTGCTTCTCGTGAATCTAGTTCAGGAAGGGATACCATTCGCATGGAATACCTTACTCTTCTTCTTAAACAAATGACAGAGCCCCTGCGAACCCTGCCTAAGGCTGAAGCAGTTCAGCAAGTTGTGGAATTGATGAATACATATTCTATCAGTCAGGAAGATTTTGATACTATAGTGGAGTTATCAAAATTCAAGGGTCATCCTAATCCACTAGATGGCATACAGCCTGCCGTTAAGTCAGCCTTGACAAAAGCATACAAAGAGCAAAGCACATCTCGAGTTGTTCGAGTTGCAGATCTAATCACTCTTCCTGGAGTAAAGAAGGTCCCTAAGAAGCGTATTGCTGCTATTCTTGAACCAGCTGCTGACGAAGAAGTGGAAAAAGGTGAAGGTGATGCCTTGAACGAGAGTGAAGAAGAAAACAGTTCTGATACAGAAGAGTTGGAAGGCACTACCAAGGGCGAGAAGCTGCAATCAGAACTTCAAAGCTTGAATTCAAAGGCCACACAAGTACAGTTGGAACTGAAGGGTACGGGAAATTCAAGTTCCAAGAAGGCATCCGGTGGTAGAGGTAAAGGTGCTTCTTCATCTGGGCAGAAGGTTGCTCAAGCTCCAAAGACTACTGCAAAAAGAAAAAGGTGA | 2955 | 0.4315 | MNSFVKYILGNGLVVLVEIVRVTNTLVQLGAKFLFSRLNAQMSDIRKWFMKTHDKGNNAASSKPSSDKPSSEKTVAGGQESSGRRITSKYFNSNKQKGKDEKETQELPAKRKNMKDSKEILEPKKILEDDEDDSVLPTNKKKLADTTPTKKLKSGSGRGIPQKSAALEESDEDDDKDAVSAAKSGGRGGGGRAAPGRSAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDKIRASKPAKASSQEKKPVNKAVAVASQSKVSPKSQVKVPLSSRSPSKQAKSKTATTVQSSLMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEQFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVNMERSKHSKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAEKLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDVRQRFLTNAKDEDISPFTAVDKLFGFNAGKMKMDERINLSMSDPDLVPLLIQENYINYRPSLAGKDDNGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQASSLATCIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYLTLLLKQMTEPLRTLPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAVKSALTKAYKEQSTSRVVRVADLITLPGVKKVPKKRIAAILEPAADEEVEKGEGDALNESEEENSSDTEELEGTTKGEKLQSELQSLNSKATQVQLELKGTGNSSSKKASGGRGKGASSSGQKVAQAPKTTAKRKR | 984 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo11g01238 | 984 | FunFam | Replication factor C subunit 1 | 367 | 555 | - | - | |
| Pumo11g01238 | 984 | SUPERFAMILY | BRCT domain | 231 | 312 | IPR036420 | - | |
| Pumo11g01238 | 984 | MobiDBLite | consensus disorder prediction | 312 | 361 | - | - | |
| Pumo11g01238 | 984 | FunFam | Replication factor C subunit 1 | 207 | 310 | - | - | |
| Pumo11g01238 | 984 | CDD | HLD_clamp_RFC | 556 | 614 | - | - | |
| Pumo11g01238 | 984 | Gene3D | BRCT domain | 208 | 310 | IPR036420 | - | |
| Pumo11g01238 | 984 | MobiDBLite | consensus disorder prediction | 94 | 148 | - | - | |
| Pumo11g01238 | 984 | MobiDBLite | consensus disorder prediction | 894 | 984 | - | - | |
| Pumo11g01238 | 984 | SMART | AAA_5 | 419 | 557 | IPR003593 | GO:0016887 | |
| Pumo11g01238 | 984 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 367 | 616 | IPR027417 | - |
Showing 1 to 10 of 32 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo11g01238 | K10754 | - | gmx:100790070 | 1583.54 |
Showing 1 to 1 of 1 entries