Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01236 ATGTCTGAAACATCGGATTCCAAAGCCACCGTCGTGGAAGATTGTCGTGGCGTTCTTCATGTTTATAGCGACGGTTCCATTGTACGCTCTTCACGCCCAAGCTTCAGCGTACCTGTAAACGACGACGGCACCGTTTTGTGGAAAGATGTCGTTTTTGACCCTGCCCACGAGCTTCAGCTTCGGCTCTATAAGCCAGCCGACTCAGCCGGCTCCAAGCTTCCCGTTTTCTTTTACTTCCACGGCGGTGGCTTTTGCATCGGCTCGCGCGCTTGGCCTAACTGTCAAAACTATTGTTTTCAGCTTACTTCTCGGCTTCGAGCCGTAGTTGTCGCCCCGGATTATCGGCTAGCCCCTGAGAACCGGCTCCCCGTTGCGATTGAGGATGGCTTTGGGGCTGTTAAGTGGCTTCAAACTCAAGCCGTGAGCGATGAGCCGGACCCATGGTTGAGCCATGTAGCTGATTTTAGCCGGGTCTTCATTTCGGGTGACTCGGCTGGAGGGAACATAGCTCACCATTTGGCAGCTCGGCTTGGGTTTGGGTCACCCGAGTTGGCTCCGGTTCAGGTCAGGGGTTATGTTCTATTGGCCCCTTTCTTTGGTGGAACTATCCGAACCAAGTTAGAAGCTGAAGGACCAAAAGATGCTTTTCTCAATTTAGAACTTATTGATAGGTTTTGGAGGCTTTCTATACCTGTTGGGGAAACTACTGATCACCCTATTGTGAATCCGTTTGGGCCGAATAGCAAGAGCCTTGAAGCAATAAATCTAGACCCAATTCTAGTGGTGGCTGGAGGAAGTGATTTGCTTAAAGACAGGGCAGAGGATTATGCAAGGAGGCTTAAGGAGTGGGGTAAAGATATAGAGTATGTAGAATTTGAAGGACAGCAACATGGGTTCTTCACTATTGATCCCAACTCAGAACCATCAAACAAGTTGATGCTGGTCATCAAACAATTCATAGAGAAGCATTTTGGGAAAGTTTGA 984 0.4909 MSETSDSKATVVEDCRGVLHVYSDGSIVRSSRPSFSVPVNDDGTVLWKDVVFDPAHELQLRLYKPADSAGSKLPVFFYFHGGGFCIGSRAWPNCQNYCFQLTSRLRAVVVAPDYRLAPENRLPVAIEDGFGAVKWLQTQAVSDEPDPWLSHVADFSRVFISGDSAGGNIAHHLAARLGFGSPELAPVQVRGYVLLAPFFGGTIRTKLEAEGPKDAFLNLELIDRFWRLSIPVGETTDHPIVNPFGPNSKSLEAINLDPILVVAGGSDLLKDRAEDYARRLKEWGKDIEYVEFEGQQHGFFTIDPNSEPSNKLMLVIKQFIEKHFGKV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01236 327 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Pumo11g01236 327 Gene3D alpha/beta hydrolase 19 325 IPR029058 -
Pumo11g01236 327 PANTHER ARYLACETAMIDE DEACETYLASE 15 304 - -
Pumo11g01236 327 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Pumo11g01236 327 SUPERFAMILY alpha/beta-Hydrolases 11 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01236 Pumo-Chr11 41845919 41847292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01236 11 321 Carbohydrate Esterase AT5G16080 34.365 1.90e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01236 - - gmx:100801391 597.816