Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01216 ATGGGGTTGATCAAGGCAGCAATTGCAGATGCAATTTTGACATCAATGTGGATTTTCATTATCTCAACATTGAGGATTGTCACAACTGAGGTAGCACTTTTCCTTGGCCTCCAACCTTTTTCACTTGCAGGCCTCTTCATCAGCACCATTTTGAACTCCCTCTATGTCCTCACCATAAGCTTCATTGGAAGGATCCTAGGTGGTGCCAGCTTCAACCCTTCAACCAGTCTTTCATTCTACACAGCAGGGTTGAGGCCTGACTCATCCCTTGCATCAATGGCAGTTAGGTTCCCTGCACAGGCCTATGGTGGTGCTGTTGGTGCCAAGACTCTTCTTCTGGTGATGCCATCTCAGTACAAGGACATGCTGAAGGGACCTTTCTTGAAGGTGGACTTGCATTCTGGTGCAATTGCTGAAGGGGTGTTGACTTTCACTCATAACATGGGTATCTTCTTTGTCATGTTTAGGGGTCCCAAGAACCCTTTTGTGAAGGTGTATTTGCTTTCTGTGACCACTGCTGCTTTGGGTATTCTTGGTGCTGGCTTCACTGGGCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTGTCAACAACAAGCACAACACTTGGGAGCAGTTTTATGTCTATTGGATTTGTCCCTTCATAGGGGCATCCTCAGCTGCTTTGGTTTTTAGCTCTATGTTTATGCCACCAATCAAGCAGAAGAAGGCTTGA 720 0.4681 MGLIKAAIADAILTSMWIFIISTLRIVTTEVALFLGLQPFSLAGLFISTILNSLYVLTISFIGRILGGASFNPSTSLSFYTAGLRPDSSLASMAVRFPAQAYGGAVGAKTLLLVMPSQYKDMLKGPFLKVDLHSGAIAEGVLTFTHNMGIFFVMFRGPKNPFVKVYLLSVTTAALGILGAGFTGPSMNPANAFGWAFVNNKHNTWEQFYVYWICPFIGASSAALVFSSMFMPPIKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01216 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Pumo11g01216 239 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Pumo11g01216 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo11g01216 239 SUPERFAMILY Aquaporin-like 3 234 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01216 Pumo-Chr11 41540906 41541875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01216 1 230 Major Intrinsic Protein MIP AT3G04090 43.478 3.37e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01216 K09875 - gmx:100797126 442.965