Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01195 ATGTCATTCGATGAACATCACTTGAGGCTTGAAAATGCAAGGCTAAGAGAAGAGATTGATCGGATTTCAGCAATTGCTGCCAAGTATGTAGGGAAGCCTGTGGTGAACTATTCAAATATTTCTCCTTCTCTCCCTCCTCGGCCACTAGAACTTGGGGTTGGTGCTGGTTTTGGAGGCCAACCAGGGATTGGTGTGGACATGTATGGAGCTGGGGATCTTCTTAGGTCAATTAGTGGGCCCACTGAAGCTGATAAGCCAATAATAATAGAGCTAGCTGTTGCAGCTATGGAGGAGCTCATTGGGATGGCACAAATGGGTGAACCTCTTTGGTTAACTACCCTTGATGGCGCATCCACTATGCTCAATGAGGATGAGTACATTAGGTCCTTCCCAAGAGGAATTGGCCCCAAACCTACTGGCTTCAAATGTGAAGCTTCTCGAGAAACAGCTGTTGTTATCATGAACCATGTCAACCTCGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAGTGTTCTCTGGTATAGTCTCAAGAGCCATGACTCTAGAAGTGCTATCAACAGGGGTAGCCGGGAACTACAATGGTGCCTTACAAGTGATGACAGCAGAACTACAACTACCTACACCACTTGTGCCAACTCGTGAGAGTTATTTTGTAAGGTATTGTAAGCAACATGCAGATGGGACCTGGGCTGTTGTGGATGTGTCTTTGGATAATTTGCGCCCAAGTCCTTCAGCCAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCAAATGGCTATTCAAAGGTCACATGGGTTGAGCACGTGGAAGTGGATGACAGAGGTGTTCACAATCTTTACAAGCAGCTTGTTAGCTCTGGAAATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTAGATCGACAATGTGAAAGACTCGCTAGTGCCATGGCAACAAGCATTCCCACTGTAGATGTTGGCGTGATAACAAACCAAGAAGGGAGAAAGAGCATGATGAAGCTGGCTGAAAGAATGGTTATAAGCTTTTGTGCTGGAGTGAGTGCTTCCACTGCTCACACATGGACAACACTCTCTGGGACCGGTGCTGATGATGTAAGGGTTATGACCCGAAAGAGTGTGGATGACCCTGGAAGACCTCCTGGCATAGTTCTCAGTGCTGCCACTTCTTTTTGGATTCCAGTGCCACCTAAACGAGTTTTTGACTTCCTCCGTGACGAAAACTCTAGGAATGAGTGGGATATTCTTTCCAATGGTGGAGTTGTCCAAGAAATGGCACACATTGCAAATGGACGAGATACTGGAAACTGTGTATCTCTACTTCGAGTAAATAGTGCCAATTCAAGCCAGAGCAACATGTTGATATTACAAGAGAGTTGCACCGATTCAACAGGGTCTTTTGTGATTTATGCTCCGGTGGACATTGTTGCAATGAATGTGGTTCTGAAATGGAGGAGACCCAGACTATGTGGCACTTCTTCCTTCAGGGTTTGCTATTCTCCCAGATGGGACCACATCGCATGGAAGTGGTGGTGGCATTGGCGAAACTGGGCAACCTGTTTACAAGAAGGATCAAAGGGACGCATTGCACTGGAAAATCAAAAGGTAGTGAGGAACTTCGGCTTATATTACAAAGATGGGGAGAAGTCAAGAACGCACCTTGCATGA 1680 0.4607 MSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPLELGVGAGFGGQPGIGVDMYGAGDLLRSISGPTEADKPIIIELAVAAMEELIGMAQMGEPLWLTTLDGASTMLNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGNAFGAKRWVATLDRQCERLASAMATSIPTVDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLKWRRPRLCGTSSFRVCYSPRWDHIAWKWWWHWRNWATCLQEGSKGRIALENQKVVRNFGLYYKDGEKSRTHLA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01195 559 CDD START_ArGLABRA2_like 85 309 - -
Pumo11g01195 559 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 492 IPR042160 -
Pumo11g01195 559 Pfam START domain 91 310 IPR002913 GO:0008289
Pumo11g01195 559 SUPERFAMILY Bet v1-like 81 312 - -
Pumo11g01195 559 Gene3D - 137 306 IPR023393 -
Pumo11g01195 559 FunFam Homeobox-leucine zipper protein GLABRA 2 90 309 - -
Pumo11g01195 559 ProSiteProfiles START domain profile. 81 313 IPR002913 GO:0008289
Pumo11g01195 559 SUPERFAMILY Bet v1-like 329 488 - -
Pumo11g01195 559 SMART START_1 90 310 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01195 Pumo-Chr11 41314179 41319793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01195 1 491 Homeobox Transcription Factor Family AT1G05230 78.905 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01195 K09338 - gmx:100782260 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01195 11 41314179 41319793 Pumo11g01195 11 41314179 41319793 ECH
Pumo4g03654 4 75829188 75834230 Pumo11g01195 11 41314179 41319793 PCT