Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01187 ATGTCTGAATTCGACACAAACATCCCAACTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACGAAAGAGTATGTTCATGTTCGTGTACAACAGCGTAACGGAAGGAAAAGCCTAACAACTGTTCAAGGATTAAAGAAAGAGTATAGCTATAGCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAAGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGAAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATAGTAAAGAAGGAACATATCAAGCTTCATGGGTTCTAA 342 0.4298 MSEFDTNIPTAFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKLHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01187 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
Pumo11g01187 113 NCBIfam translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Pumo11g01187 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Pumo11g01187 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Pumo11g01187 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Pumo11g01187 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Pumo11g01187 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Pumo11g01187 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Pumo11g01187 113 Gene3D - 2 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01187 Pumo-Chr11 41201856 41205019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01187 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 1.24e-75 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01187 K03113 - gmx:100784390 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01187 11 41201856 41205019 Pumo11g01187 11 41201856 41205019 ECH