Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01184 ATGGTTGAACGGAAGCAGTTCAAGACTAAGTTATGCGTTCTGTATCAGAGAGGTCGCTGCAATCGCCATAATTGCTCCTTCGCGCATGGGAGTGCCGAGCTTCGACGATTCTCTGCCTCATACAGTGGGAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGAGAGAAGGCATTTATCTCCTCGAAGGTACTCACCAGCTCCAGATGCAAGAGGCCGCCAGACCATCCGTGAATACAGTCCTTCAAGGTCTTTGGAGAAAAAAAGTGACAGAAGACATAGGAGAAAACAGGGTGTTACTGGCCAAAGTGATATTTCTGGAAATTTGAATGTCTCAGATAGAGTTCAAGATCGAGTTAAAGAAGGAAAATTGCTTTCATCTGGTTCTAGGAATACTCTTGAGGAGCAGCTGAAGAAAGTAGATTCAGATATCAGCACTCTTCAGAACCGAAAATTCCAGCTAGAGGTCTACCTTGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAATTATGCAAAGAGGATGAGGATTGCAAAAGAATTACTTCAAGAATAAGGAAATTTGTTAGAGTGCACAATCATATGTCACAGTTACAAGATGAACTGAAGAGATCACAAGTCCGAGTTCAAAGGTTTGGAGATCAGCTTGTCTCAGACATTTCTAGAATTGGTGTCAATGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAAAATACTGGTCTTCCTCCAATTGTCAAACATAATGTGGGGCACAACGATGCATCTTCCCACAGAAAAAGGCTGCATACTGAACATGATGCTTTGGAAGAGTTAAAACAAGATAGATCAAAAGATGGGCATTTGGTTGAGACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATTTATCAGATCAATTGAATGACGACTCCCTTGGGACTCCAGACAATGGAACTGAAGTTACTAGACCTTTAGATCTTGAAGGCAAGCACAAGAAAGGAGTGAAGCAACCCAGGATTGAAGCTGCCATCAACCAGCATGGCAGCTCATGTGGTTGA 1071 0.4211 MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRFSASYSGRRDYLGNDLRDKLERRHLSPRRYSPAPDARGRQTIREYSPSRSLEKKSDRRHRRKQGVTGQSDISGNLNVSDRVQDRVKEGKLLSSGSRNTLEEQLKKVDSDISTLQNRKFQLEVYLDESVQEVDSLNSRIQELEAQLCKEDEDCKRITSRIRKFVRVHNHMSQLQDELKRSQVRVQRFGDQLVSDISRIGVNEEDLSIDIVSNGENTGLPPIVKHNVGHNDASSHRKRLHTEHDALEELKQDRSKDGHLVETARTRKRSRWNLSDQLNDDSLGTPDNGTEVTRPLDLEGKHKKGVKQPRIEAAINQHGSSCG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01184 356 Coils Coil 160 180 - -
Pumo11g01184 356 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Pumo11g01184 356 Gene3D - 1 36 - -
Pumo11g01184 356 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 339 IPR045868 GO:0046872
Pumo11g01184 356 Coils Coil 132 152 - -
Pumo11g01184 356 MobiDBLite consensus disorder prediction 305 328 - -
Pumo11g01184 356 Coils Coil 205 225 - -
Pumo11g01184 356 MobiDBLite consensus disorder prediction 58 115 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pumo11g01184 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01184 - - gmx:100811131 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01184 11 41159054 41166783 Pumo11g01184 11 41159054 41166783 ECH