Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01157 ATGGACAATGGGAACCTTATTGTTAGTGATGAAGTTGAAGAGCGAGGAAACCATCAAGTGAAGATTCTATGGCAGAGTTTTGCTAATCCAACAGATACATTTCTTCCTGGCATGAAAATGGATGACAATTTAGCACTAACTTCATGGAGAAGTTATGAAGATCCTGCACCAGGGAACTTCTCTTTTGAGCATGATCAAGTGGAGAACCAGTATATAATATGGAAGAGGTCCATCAGGTATTGGAAAAGCAGTGTTTCAGGTAAGTTTGTTGGAACTGGTGAGATGTCTACAGCAATATCTTACTTCTTGTCAAGTTTCACTTTGAAAGTGTCCCCAAACAACACTGTTCCCTTTCTCACTTCAGCACTTTTTAGTGACACAAGGTTGGTCATGACTCACTGTGGCCAACTTAAGTACGTGAAGATGGATTCAGAGAAAATGTGGTTGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGCTGTAATAGCAAGTATGATTCCATGTGCAAGTGTTTGCCTGGGTTCAAGCCTAATTCCATTGAGAGTTGGAATGCTGGAGACTTTTCAGGTGGATGCAGCAGGAAAACAAATGTGTGTAGTGGGGATGCTAAGGGTGACACATTTTTTAGCTTGAAAATGATGAAAGTGGGGAACCCAGATGCTCAATTTAATGCTAAGGATGAAGAGGAATGCAAGTCAGAGTGCCTCAACAATTGCCAGTGTTATGCTTATTCATATGAAAACACTGAAAAGGGAAGGCTGGGTGATGGTGAGGATGTAGTTTGCTGGATTTGGTCTGAGGACTTGAACAATCTTGAAGAAGAGTATGAAGATGGGTGTGACCTGCATGTTCGTGTGGCAGTTTTTGATATAGAATCCACTGGGAGAAATTGTGGGACCTGTGGTACAAACTTCATTCCATATCCCCTCAGCACAGGACCAAGTTGTGGTGATCCCAGGTACTTCAGTTTTCACTGCAACATCTCCACTGGTGAGCTTCAATTTGAGACTCATGGGGGCACCTATCAAGTGATAAGCATAAACCCAGAAACACAAAAATTCTTGATCCACAGAAAAAATGTACTTAACTGTGATCAAAGTTCAAGGGATAAGTTTCTGCCTCTCAACCAGTCATTTCCGTTTCATCTTACTGGAAAATGCTATGCTGATCCAAGCATTTTTAGTTCAAATGCTCCCATGAAACATGGAGTAGAAATAGAGTTACGTTGGGAGCCGCCATTAGAGCCTATTTGCTCTTCATTCTTGGACTGCAAGGACTGGCCAAATTCAAATTGCAACACTTCCAGTGATGGCAAGAAGAGGTGCCTTTGCAACACAAACTTTCTTTGGGATGGATTGAAATTAAATTGTACTCTAGAAGGCAATTATAGCTATCAATCAGAAAGGCAACTGTCCTTATCTAAGATCATTGTAATTACTTTTACAACTGTGATTGGCTTAATTCTTCTCTCAACTACTGTTACATGTGTTTACTTGAGGAAAAGGAGACAGGCCAAACCTCAAGATAGCAGGGGATATGTTCAGAAAAACTCAGGGATTAACTTGTATGACAGTGAGAGACATGTCAGAGACTTGATTGAATCCAGTAGGTTCAAAGAAGATGATGCACAGGCCATAGATATTCCATATTTCCATTTGGAAAGCATACTTCATGCTACTAATAACTTTGCAAATACAAACAAGCTTGGACAAGGAGGGTTTGGTCCTGTCTACAAGGGAAAGTTTCCTGGAGGGCAAGAAATTGCAGTGAAGAGACTTTCAAGTTGTTCTGGACAAGGGTTAGAAGAGTTTAAAAATGAAGTTGTGTTGATTGCCAAGCTTCAACATAGGAACCTAGTTAGACTTCTGGGGTACTGTGTGGAAGGAGATGAAAAGATGCTAGTATATGAATATATGCCAAATAGAAGCTTGGATGCTTTCATTTTTGACCGGAAGCTGTGTGTTCTATTAGACTGGGATGTGCGCTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTATCTACATGAAGATTCTAGGTTGAGGATTATTCACAGGGACTTGAAAGCAAGCAACATTCTACTAGATGAAGAGAAGAATCCTAAAATTTCAGACTTCGGCTTAGCCAGGATATTTGGAGGAAAAGAGACAGTAGCCAACACAAATAGAGTGGTTGGAACTTATGGGTACATGTCTCCAGAGTATGCACTTGATGGACATTTTTCAGTCAAGTCTGATGTCTTTAGCTTTGGGGTGGTGGTACTTGAGATTATTAGTGGAAAAAGGAACACTGGATTTTATCAAGCAGATCATGAATTAGGTCTTCTAGGATATGCATGGCTTTTGTGGAAAGAAGGAAAGGCATTGGAGTTCATGGACCAGACACTATGTCAAACATACAATGCAGATGAATGCTTGAAATGTGTGAATGTGGGACTCTTGTGCTTACAAGAAGATCCAAATGAACGCCCCACAATGTCAAATGTGGTTTTCATGCTTGGTAGTGAATCTAACACTCTTCCAAGTCCTAAGGAACCAGCCTTTGTTATCAGGAGATGCCCTTCAAGTAGAGCATCTACTTCAAGTAAATTGGAAAACTTTTCACGTAATGAATTGACAGTCACTATAGAACATGGCAGGTAG 2676 0.4077 MDNGNLIVSDEVEERGNHQVKILWQSFANPTDTFLPGMKMDDNLALTSWRSYEDPAPGNFSFEHDQVENQYIIWKRSIRYWKSSVSGKFVGTGEMSTAISYFLSSFTLKVSPNNTVPFLTSALFSDTRLVMTHCGQLKYVKMDSEKMWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGFKPNSIESWNAGDFSGGCSRKTNVCSGDAKGDTFFSLKMMKVGNPDAQFNAKDEEECKSECLNNCQCYAYSYENTEKGRLGDGEDVVCWIWSEDLNNLEEEYEDGCDLHVRVAVFDIESTGRNCGTCGTNFIPYPLSTGPSCGDPRYFSFHCNISTGELQFETHGGTYQVISINPETQKFLIHRKNVLNCDQSSRDKFLPLNQSFPFHLTGKCYADPSIFSSNAPMKHGVEIELRWEPPLEPICSSFLDCKDWPNSNCNTSSDGKKRCLCNTNFLWDGLKLNCTLEGNYSYQSERQLSLSKIIVITFTTVIGLILLSTTVTCVYLRKRRQAKPQDSRGYVQKNSGINLYDSERHVRDLIESSRFKEDDAQAIDIPYFHLESILHATNNFANTNKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDAFIFDRKLCVLLDWDVRFKIILGIARGLLYLHEDSRLRIIHRDLKASNILLDEEKNPKISDFGLARIFGGKETVANTNRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQADHELGLLGYAWLLWKEGKALEFMDQTLCQTYNADECLKCVNVGLLCLQEDPNERPTMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASTSSKLENFSRNELTVTIEHGR 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01157 891 Pfam D-mannose binding lectin 1 44 IPR001480 -
Pumo11g01157 891 SMART ntp_6 213 296 IPR003609 -
Pumo11g01157 891 CDD STKc_IRAK 579 844 - -
Pumo11g01157 891 SMART serkin_6 573 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01157 891 CDD PAN_AP_plant 209 297 - -
Pumo11g01157 891 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 54 IPR036426 -
Pumo11g01157 891 SUPERFAMILY Protein kinase-like (PK-like) 555 844 IPR011009 -
Pumo11g01157 891 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 649 852 - -
Pumo11g01157 891 ProSiteProfiles EGF-like domain profile. 155 191 IPR000742 -
Pumo11g01157 891 Pfam S-locus glycoprotein domain 86 188 IPR000858 GO:0048544
Pumo11g01157 891 Gene3D Phosphorylase Kinase; domain 1 535 648 - -
Pumo11g01157 891 Pfam Domain of unknown function (DUF3403) 846 891 IPR021820 GO:0004674
Pumo11g01157 891 PIRSF SRK 429 891 IPR024171 GO:0004674
Pumo11g01157 891 PIRSF SRK 1 316 IPR024171 GO:0004674
Pumo11g01157 891 Pfam Protein tyrosine and serine/threonine kinase 576 842 IPR001245 GO:0004672|GO:0006468
Pumo11g01157 891 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 870 - -
Pumo11g01157 891 ProSiteProfiles Protein kinase domain profile. 573 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01157 891 ProSiteProfiles PAN/Apple domain profile. 209 290 IPR003609 -
Pumo11g01157 891 Gene3D Transferase(Phosphotransferase) domain 1 649 854 - -
Pumo11g01157 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Pumo11g01157 891 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 538 648 - -
Pumo11g01157 891 Pfam PAN-like domain 212 281 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01157 Pumo-Chr11 40312044 40316705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01157 544 891 Receptor kinase-like Gene Family AT4G05200 52.514 4.82e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo11g01157 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01157 - - gmx:100775297 1753.8