Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01150 ATGCTGAAGCGCCGAAAGAGGCACGTTGGGACCAGAACATCAGTGGAGGGCTCATTGATGGCATTTGGCTACAGGGATTTGCAAAATGCCACAAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGCTTTGGTTCTGTCTTCAAAGGAGCATTGCCTGATTCAAGTGTCATTGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACAATTGGGACAGTTCAACATGTCAACCTTGTAAGGCTTCGTGGGTTCTGTTCTGAAGGTACTAAGAAACTTCTGGTTTATGATTACATGCCAAATGGTTCCTTGGACTCCAAAATGTTTCATGAAGATAGCTCCAAGGTGTTGGATTGGAAAGCGAGGTACCAAATTGCTCTTGGAACAGCAAGGGGATTGACTTATCTTCATGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATGCTGATTTTGTTCCAAAGGTGGCAGACTTTGGTCTTGCAAAGCTTGTTGGAAGGGACTTTAGTAGAGTCCTCACTACCATGAGAGGGACAAGAGGCTATCTTGCCCCAGAGTGGATTTCAGGTGTGGCTATCACTGCCAAAGCTGATGTCTACAGCTATGGAATGATGCTTTTTGAGTTTGTGTCAGGTAGGAGGAACTCTGAGGCATCAGAAGATGGCCAAGTAAGGTTCTTCCCTACCTTTGCTGCTAACATAGTGCACCAAGGAGGCAATGTGCTAAGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTCACTAGAGTCATCAAAGTTGCCTCATGGTGTGTCCAAGATGATGAATCTCACAGGCCTTCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGTTCTTGGATGTGACTTTGCCTCCAATTCCAAGGACCCTCCAAGCCTTTGTTGACAACCATGAGAACATAGTTTTCTTCACTGACTCCAGCTCCACACAGAGTTCACAGGTAAAGAGTAATGCCTCAATTGCCTCCTCTCAAGCCAAAAGCAACATCTCATCCAATAGTAACACCTAG 1089 0.4582 MLKRRKRHVGTRTSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGALPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNGSLDSKMFHEDSSKVLDWKARYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVRFFPTFAANIVHQGGNVLSLLDPRLEGNADIEEVTRVIKVASWCVQDDESHRPSMGQVVQILEGFLDVTLPPIPRTLQAFVDNHENIVFFTDSSSTQSSQVKSNASIASSQAKSNISSNSNT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01150 362 MobiDBLite consensus disorder prediction 340 362 - -
Pumo11g01150 362 ProSiteProfiles Protein kinase domain profile. 32 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01150 362 FunFam Serine/threonine-protein kinase 1 106 - -
Pumo11g01150 362 CDD STKc_IRAK 38 305 - -
Pumo11g01150 362 PANTHER OS07G0415500 PROTEIN 5 314 - -
Pumo11g01150 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pumo11g01150 362 FunFam Serine/threonine-protein kinase 107 310 - -
Pumo11g01150 362 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Pumo11g01150 362 SUPERFAMILY Protein kinase-like (PK-like) 17 337 IPR011009 -
Pumo11g01150 362 Gene3D Phosphorylase Kinase; domain 1 1 106 - -
Pumo11g01150 362 Pfam Protein kinase domain 35 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01150 362 Gene3D Transferase(Phosphotransferase) domain 1 107 309 - -
Pumo11g01150 362 SMART serkin_6 32 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01150 Pumo-Chr11 40267283 40268371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01150 15 312 Receptor kinase-like Gene Family AT5G20050 44.586 3.36e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo11g01150 Pkinase 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01150 - - gmx:100305421 667.151