Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01147 ATGGCTACTGAAAAGCTTGGATGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCTACTTGGCCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTAGTGGTTTATCGCCACTCCTTCGCCACCGCCATCATCGCTCCTTTTGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAGTTTTCATGCAGATTTTTGTCCTAGCTCTTCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGCGTTGAAGCTCACATCCCCAACTTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCAGTGTTTTGCCGACATAAAGAAGGTGAGATGTATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGGGTTATGCGCTGATGACATTATACAGAGGTCCTATAGTGGAGACGGTATGGGCCAAACATCCACACAATAAGACCAATGCAACAGCCACCACAGGATCATTGGACAAAGCTTGGCTCTTAGGCTGCATCTTTCTCATCATTGCCACCCTTGCTTGGGCTTCCCTCTTTGTTTTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAGCTAAGCCTAACTTCACTAGTGTGCTTTATAGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATTCTTCTGTATGGAGAATTGGCTGGGATATGAACTTACTTGCAGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTGCAAGGACTGGTAATTAAGAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCACCAAGGGGTCCTTTATCCTCGCAGAACAAATTTATCTTGGAGGTTATGTTTCTCCTGGTGGTTGCTGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTGTACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGCTGTAATTGCAGGGCCAATGATTGATGCCACTGATAATTTTACAGAAGAAAAATATGGTCAGAAAGGAGAAGCCAACAATAAGCTCTCTCACTCGTAA 1182 0.4264 MATEKLGCCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHSFATAIIAPFAFIFERKGQPKITFPVFMQIFVLALLGPVIDQNFYYAALKLTSPTFSCAMSNMLPAMTFVMAVFCRHKEGEMYSKDSGNISDSGRGYALMTLYRGPIVETVWAKHPHNKTNATATTGSLDKAWLLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNSSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVATKGSFILAEQIYLGGYVSPGGCCVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQIAVIAGPMIDATDNFTEEKYGQKGEANNKLSHS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01147 393 Pfam EamA-like transporter family 189 329 IPR000620 GO:0016020
Pumo11g01147 393 Pfam EamA-like transporter family 18 129 IPR000620 GO:0016020
Pumo11g01147 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 129 - -
Pumo11g01147 393 PANTHER WAT1-RELATED PROTEIN 17 346 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01147 Pumo-Chr11 40198647 40201323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01147 1 390 Nodulin-like Gene Family AT5G07050 60.741 4.01e-166 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01147 - - gmx:100804390 654.44