Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01131 ATGCGTTGGTCTTCCTTCTATCACACAGCCTCGAGGGTTTTCAATGAGTATCCATCATGGTCCAAGTCTGTTGTTGTGTGCACTGTCATCAGTGGTGGGGGTCTAGTGGCATATTGCAAGGCCAAACCAGAATACGCTAGTCAAAGTCCAAAAAAGAAGTTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTTTGAAAAATATGAAAAGCAACTCCTATGATATTCATGTGGTTTCACCACGTAACTATTTTGCATTCACTCCATTGCTACCAAGTGTCACGTGTGGCACAGTGGAAGCAAGGAGCGTCGTTGAACCCATTCGCAGTATCACCCGCAAGGAGAACTCTGTTCAACAGAGCGGTGTAAATATTAGTTTCAGTGAAGCTGAATGCTATAAGATCGATAACAAGAACAACAAAGTTTATTGCCGTGCTGCTAAAGACAAAAACTTGGGTGGCCTAGAAGAATTTTCCATTGATTATGATTACCTGGTAATAGCTATGGGGGGTCGTTCTAATACCTTCAACACACCTGGTGTTCAGGAGCATGCCCATTTCTTGAAGGAAGTGGATGAAGCTCTAAAAATTCGTCAGAAAGTGGTTGACCTTTTTGAAAAAGCTAGCCTTCCTTCTTTACCAGCGGAAGAGAAGAAAAAACTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTTCTGCTGAGCTTCATGACTTTGTACATGAGGATATGGCTAAGTTATATCCTTCCCTTAAAGACTATGTGAAGATTACTCTCCTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAACAGAAGTTCGCCAGAGATGGCATTGATGTGAAGTTGGGATCTATGGTTGTCAAAGTTGGTGAAAACGAAATCACTGCCAAAGAAAGGTCAACTGGTCAAGTTGTTGCTATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAAATAGTTGAATTTATGAAGCAGCTTGGCCAGATTAACAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTGGAAGGATCTGACAACATCTATGCTCTAGGTGATTGTGCCACTATAAATCAACGTAAAGTTATGGAAGATATAGCGGTGATATTTAGCAAGGCTGACAAGAACAATTCTGGAAAATTAGATCTTAAAGAATTTAAAGAAGTTGTTGGTGACATTATTGAGAGGTACCCACAAGTGGACATTTATTTAAAGAAGAACCAAATGAGAGACATGGCCAGCTTGCTAAAGAAATCTCAAGATAGCAATATTATAGTGGACATTGAATACTTTAAAGAAGCTCTTTCCAAAGTAGACTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCACAACAAGGAGTCTATCTTGCAGACTGTTTCAACCGCATGGAGTTGTGTGAGAAGTATCCAGAAGGCCCTCTCAGGTTCAGGGGAGTTGGACGCCATCGGTTCCGTCCCTTCAGGTACAAGCATTTGGGGCAATTTGCTCCTCTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCAGAGCACCCAGTGGCTCTGGTATTCTGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGGTTTTTGGTGGTTGGTGACTGGGGAAGGCGATTCATATTTGGAAGGGACTCAAGTAAAATCTAA 1737 0.4277 MRWSSFYHTASRVFNEYPSWSKSVVVCTVISGGGLVAYCKAKPEYASQSPKKKLVVLGTGWAGTSFLKNMKSNSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITRKENSVQQSGVNISFSEAECYKIDNKNNKVYCRAAKDKNLGGLEEFSIDYDYLVIAMGGRSNTFNTPGVQEHAHFLKEVDEALKIRQKVVDLFEKASLPSLPAEEKKKLLSFVVVGGGPTGVEFSAELHDFVHEDMAKLYPSLKDYVKITLLEAGDHILNMFDKRITEFAEQKFARDGIDVKLGSMVVKVGENEITAKERSTGQVVAIPHGMVVWSTGIGARPEIVEFMKQLGQINRRALVTDEWLRVEGSDNIYALGDCATINQRKVMEDIAVIFSKADKNNSGKLDLKEFKEVVGDIIERYPQVDIYLKKNQMRDMASLLKKSQDSNIIVDIEYFKEALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMELCEKYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFIFGRDSSKI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01131 578 Gene3D - 450 578 - -
Pumo11g01131 578 Gene3D - 44 431 - -
Pumo11g01131 578 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Pumo11g01131 578 SUPERFAMILY EF-hand 374 465 IPR011992 -
Pumo11g01131 578 PANTHER NADH DEHYDROGENASE 46 578 IPR045024 GO:0003954|GO:0006116
Pumo11g01131 578 SMART efh_1 384 412 IPR002048 GO:0005509
Pumo11g01131 578 SUPERFAMILY FAD/NAD(P)-binding domain 51 276 IPR036188 -
Pumo11g01131 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 382 IPR023753 GO:0016491
Pumo11g01131 578 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Pumo11g01131 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 42 409 - -
Pumo11g01131 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Pumo11g01131 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 352 374 - -
Pumo11g01131 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 224 242 - -
Pumo11g01131 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Pumo11g01131 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 425 577 - -
Pumo11g01131 578 SUPERFAMILY FAD/NAD(P)-binding domain 217 377 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01131 Pumo-Chr11 39840657 39847269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01131 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 67.517 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01131 K03885 - gmx:100820044 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01131 11 39840657 39847269 Pumo11g01131 11 39840657 39847269 ECH