Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01127 ATGATTCTGAAGATGATGATTATGACTCAGAGAGGAAAGAAGACAACCACAATATCAATACGGAAGGAACTGATGATAGCGCTCGCATATGATGATTTAAGCAATTCTACCAGTCTGTGTTCTTCTAAGGCTGATGATAGTGCATCTAAACATTGTTATTTGTTTTTACCACTGAGTTATTCTTTTTCATTTTTGGCAATTCTTATTCTTTCGTTGGTGATGGGCATGCTCAAAGGGGTTGTTTCCACGAAAATTCAATACTGCATTATTTGCCTCAAGGTTTTTCCATCTGGCCAAGCCTTGGGTGGCCATAAGAGATCAGTTCTTCAGGATTGGTGGTTTGAGAAGAAACTGTTTGAAATATCTGATGCTAAAGTACTCAAACAGTAG 390 0.3795 MILKMMIMTQRGKKTTTISIRKELMIALAYDDLSNSTSLCSSKADDSASKHCYLFLPLSYSFSFLAILILSLVMGMLKGVVSTKIQYCIICLKVFPSGQALGGHKRSVLQDWWFEKKLFEISDAKVLKQ 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01127 129 Pfam C2H2-type zinc finger 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01127 Pumo-Chr11 39793047 39795106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01127 80 107 C2H2 Transcription Factor Family AT3G60580 71.429 4.53e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01127 - - tcc:18604787 47.3654