Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01120 ATGGCGAACGGGTTAGAGAGAGAAAGTGGGTTGACGTTGTTCAGCGATGAGGAGCTGAGGGAGGTGAGTGGGGTGAAGCGTGTTGGGGACTATGTCGAAGTCACGTGCGGGTGCACGAGCCATAGATATGGTGACGCTGTGGGAAGACTTAGGGTTTTCGTTAATGGGTACCTTGAAATCACTTGTGAATGCACCCCTGGTTGTCAAGAAGACAAGTTGACTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACTGCCAGGAAATGGAAGAATAATGTCTGGGTAATTGTTAATGGTGAAAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAATCAGGTGTCAAAAGCTGCAAATGGCTCCCATAGATCCCAAAATGGCCGGGCTTGTCACCGTGATGAGTTTGTTCGCTGCACTAGTTGCAATAAAGAGCGTAGGTTTCGTCTGAGGACTAAAGAGGAATGCCGCATTCACCATGATGCTTTGGCAGATGCAAATTGGAAATGTTCTGATCTTCCATATGACAAAATTACATGTGATGATGAAGAAGAAAGAGCAAGTCGTAGAGTTTACAGGGGATGCACTCGTTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATATCTGCCGCTTTTCAGATTGCAGCTGCCAGACTTGTGCTGACTTTACAAACAATGCCAAAGCTTGA 711 0.4599 MANGLERESGLTLFSDEELREVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSQNGRACHRDEFVRCTSCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDKITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01120 236 PANTHER PROTEIN ULTRAPETALA 1 12 235 IPR020533 -
Pumo11g01120 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01120 Pumo-Chr11 39722447 39726982 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Pumo11g01120 SAND 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01120 - - gmx:100796203 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01120 11 39722447 39726982 Pumo11g01120 11 39722447 39726982 ECH