Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01117 ATGTATTTCGGAGTTAGTGATCTAAGCAGCAACAACATTGGAGGAAATATTCCATCCAGTTTGCCAGTTACCTTGAAAAACTTTTTTCTTGCAGCCAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCCACTTTGACTGGACTGACAGACATGTCTCTTAACGAGAACTTTTTAACTGGAGAAATACCAGATGCTTTTCTGTCACTTACGCAATTGATCAATCTAGATTTATCTCATAATAATTTGAGTGGGGAATTGCCTCCTTCTATGGATAACTTGTTGTCTCTGACCACCCTACGCTTACAGAACAATCAACTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGTCCAATACCTCCAAAGTTGCTAAGCATACCTGCCTTCAGACAAGCTGGAAACCCATTTAATGTTAATGGTACTACAACTCCAGCTTCTTCACCTCGCTCCCCAGCAATAGCACCCCCAGGAACTCCTGTTTCTGGGGCACCACCAGGAACTCCTGTTTCTGGGACACCACCATCTTCTGGCCGTGTACCTACTAAACAGGCTGATGGGCCAACTGCAGCAAATGAATCAAATACTGGGAAATCCAAAAAATCCACAAAAAAGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGCATTCGTTCTCTTTATTCCAAGATGTAGCAGAAGAGAACGGGATGACAGAAGGTCCAAGCGACATCAAATTGGTGCATATGGGGGTGAAAGACAAAATGGCAGGGATTACGGAGCTTTTGTCCAACCACCTAGTCAAATGGAAAAAGTACCAGTAAGGGATATTCCAAATCCAAAAGAGGGTGATCAAGCAGAGACCAGGAGAACTTGGGTTAATCCAAATCCAAATCCAAATCCACAGAGTGAGCAAGAGAAGGATGTGCAAAGAATGGCAACAATACCAAAGCCAGGAGAGCATCAGATAGATATGAGTACACTAGAAGTATATTCAATGCCTCCTCCTCCTCCCCCTCCACCCCCACCTCCCCCTCCCCCACCTCCACCACCACCACCACCACCTCCACCTCCTACTACTACTGAGAAGGTGATTGTTGAGCCAGCCACATCCCGCAGAGGGACTAATGTCAATCCACCCATAAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTCGCCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGACAAGGCATGCTGGGTAATGTGTATAGAGCAGAGCTTCCTAACGGCAAGTTACTTGCTGTAAAGAAACTGGACAAGAGAGCCTCTGAACACCAGAAGGATGACGAATTTCTTGAATTGATAAATAGTATTGACAGAATACGGCATGCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAATACTGCAGTAATGGGTCACTGTATGATGCACTCCACTCAGATGATGACTTCAAAACAAGACTCTCATGGAATGCTCGTATTCGGATAGCACTTGGGGCTGCTAGAGCCTTAGAATATCTGCATGAGCAAAGTCAGCCACCTGTGGTACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGACGATGATCTATCAGTGCGGGTCTCTGATTGTGGTTTAGCTCCATTAATAGCTTCGGGATCAGTCAGTCAGCTCTCCGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATTTACACATACCAAAGTGATGTGTACAGCTTTGGAGTGATTATGTTGGAACTTATGACTGGCCGTCAGTCCCATGATAGGGCACGTCCACGAGGGGAGCAATTTCTGGTCAGATGGGCCGTTCCCCAACTTCATGATATCGATGCGTTATCAAGGATGGTTGATCCTTCTTTAAATGGAAATTACCCAGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCCGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTTGTCCTATACTTACTAAATATGATAAGAAAGGAGCCTCAGCAAAGTGAATCAAATGAAAAATGA 2130 0.4362 MYFGVSDLSSNNIGGNIPSSLPVTLKNFFLAANQFTGSIPTSLSTLTGLTDMSLNENFLTGEIPDAFLSLTQLINLDLSHNNLSGELPPSMDNLLSLTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLSIPAFRQAGNPFNVNGTTTPASSPRSPAIAPPGTPVSGAPPGTPVSGTPPSSGRVPTKQADGPTAANESNTGKSKKSTKKVVWISIASVLGFIILLLAFVLFIPRCSRRERDDRRSKRHQIGAYGGERQNGRDYGAFVQPPSQMEKVPVRDIPNPKEGDQAETRRTWVNPNPNPNPQSEQEKDVQRMATIPKPGEHQIDMSTLEVYSMPPPPPPPPPPPPPPPPPPPPPPPPPTTTEKVIVEPATSRRGTNVNPPIRSSVPPPTFAKFFAIASLQQYTNSFSQENLIGQGMLGNVYRAELPNGKLLAVKKLDKRASEHQKDDEFLELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKTRLSWNARIRIALGAARALEYLHEQSQPPVVHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELMTGRQSHDRARPRGEQFLVRWAVPQLHDIDALSRMVDPSLNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKEPQQSESNEK 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01117 709 MobiDBLite consensus disorder prediction 342 375 - -
Pumo11g01117 709 Pfam Protein tyrosine and serine/threonine kinase 422 691 IPR001245 GO:0004672|GO:0006468
Pumo11g01117 709 Gene3D Ribonuclease Inhibitor 4 153 IPR032675 -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 247 323 - -
Pumo11g01117 709 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 497 707 - -
Pumo11g01117 709 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Pumo11g01117 709 ProSiteProfiles Protein kinase domain profile. 419 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01117 709 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 385 496 - -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 186 216 - -
Pumo11g01117 709 SUPERFAMILY Protein kinase-like (PK-like) 396 693 IPR011009 -
Pumo11g01117 709 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 3 162 - -
Pumo11g01117 709 Gene3D Phosphorylase Kinase; domain 1 394 496 - -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 163 185 - -
Pumo11g01117 709 Gene3D Transferase(Phosphotransferase) domain 1 497 709 - -
Pumo11g01117 709 Pfam Leucine rich repeat 24 83 IPR001611 GO:0005515
Pumo11g01117 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 700 IPR046959 -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 302 322 - -
Pumo11g01117 709 SUPERFAMILY L domain-like 7 150 - -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 344 375 - -
Pumo11g01117 709 MobiDBLite consensus disorder prediction 149 216 - -
Pumo11g01117 709 SUPERFAMILY Formin homology 2 domain (FH2 domain) 361 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01117 Pumo-Chr11 39674033 39684305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01117 7 704 Strubbelig Receptor Gene Family AT4G03390 60.280 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo11g01117 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01117 - - gmx:100811490 942.569