Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01116 ATGGGTTGGAAGAGATCTGGCTTGCAGTGGGAGAGAGTAAAGATCTATGGACAAGTTCTATTGGGTTTTTTGTTGATCTGCACAATTCAGACTTCAAGTGCAGTCACTGATCCCACTGATGTTGCTGCAATTAATAGCTTATATATTGCACTGGGATCCCCTGTTCTGCCTGGGTGGGTTGCTAATGGAGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGATCATTCATACAAAAAATAGTTCTAAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTGTCAACTTTTGTTTCAATCTCAGTAATGTAA 327 0.419 MGWKRSGLQWERVKIYGQVLLGFLLICTIQTSSAVTDPTDVAAINSLYIALGSPVLPGWVANGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDKLSTFVSISVM 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01116 108 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01116 Pumo-Chr11 39672763 39673867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01116 20 108 Strubbelig Receptor Gene Family AT2G20850 59.551 4.16e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01116 - - gmx:100814012 205.297