Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01110 ATGGGTTGTTGTGTCTCAACAAGCAGCAGGAGTACTTGTAGCAGCAAGAGCAATGGAGACATGGTCTCTCCATCTTGCTTAGAAATTGGATTCTGTGGGCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTCACCAATGGAAAGAGCCGGGGTTCGTGCATATTCACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTCTTTGATGGTCATGGTCCACATGGTCACCTTGTTGCGCGCAAAGTGAGGGATGCCTTGCCAATTAAACTGCTTTCATTTTTGCATTCTAGTGAATCGAAGCGAAATGGGTCAGGTAAAACATGCTTCAAAGGGAATGTAAAACCTGATAGTGGAGAGTCTGAGAAGGATTGCTCTGCGGAGGATAAACTGAACTCTACTTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTAAGGTCTCATCCGAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCTACATTGGGGATTCTCGGGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGAAGTGCAAAGGTAGAGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGAGTGATTTCTATACCTGAATTTTCTCACCGGCAGCTTACGGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTGTGGGATGTTTTAACCAATGAGGAGGTGGTTGAGATAGTATCTTCAGCACCAACGCGATCATCGGCGGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTCAAATACCCTACTTCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGAGGACCAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCGGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACAAATGGAGCACTATCTGTTGATGTTGTTGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTAGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCCAACTCTTGA 1416 0.447 MGCCVSTSSRSTCSSKSNGDMVSPSCLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPIKLLSFLHSSESKRNGSGKTCFKGNVKPDSGESEKDCSAEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLTNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEDQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALSVDVVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01110 471 CDD PP2Cc 65 370 IPR001932 -
Pumo11g01110 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pumo11g01110 471 MobiDBLite consensus disorder prediction 381 427 - -
Pumo11g01110 471 MobiDBLite consensus disorder prediction 1 20 - -
Pumo11g01110 471 Pfam Protein phosphatase 2C 96 347 IPR001932 -
Pumo11g01110 471 SMART PP2C_4 50 368 IPR001932 -
Pumo11g01110 471 MobiDBLite consensus disorder prediction 130 156 - -
Pumo11g01110 471 MobiDBLite consensus disorder prediction 380 448 - -
Pumo11g01110 471 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Pumo11g01110 471 Gene3D - 59 372 IPR036457 -
Pumo11g01110 471 PANTHER PROTEIN PHOSPHATASE 65 368 IPR015655 GO:0004722|GO:0006470
Pumo11g01110 471 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01110 Pumo-Chr11 39565307 39569818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01110 1 471 PP2C-type Phosphatase Gene Family AT1G03590 69.392 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01110 - - gmx:100813306 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01110 11 39565307 39569818 Pumo11g01110 11 39565307 39569818 ECH
Pumo4g03558 4 74205667 74208782 Pumo11g01110 11 39565307 39569818 PCT