Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01106 ATGGAGACTGTTCTTTTCAATCACTCCCCACCTTTGGAATTCAAGGGTTTGAGCAAGGAGGAGGAAGACTCATTGCTAGGGCAAGTTGAAATATGGAGGTACATGACATGCTTCACAGACTCCGTGGCTTTGAAATCTGTCATAGAGCTGCGCATAGCCGACATAATAGACCGCTATGGTAAGCCACTATCCTTGTCTCAGATTGTGGAGAACATAGAAGATGCACCCTCCCCAGATGCCTCTCTTCTCCAAAGAGTGATGAGAGTGATGGTGCGCAGAAAGATCTTCAGTGCAGAACAATCAGAGACTGGAGAAACCCTCTATGGCTTGACACGTGCCTCGAAGTGGATCCTACGTGACACAAAAATGACCCTGGCACCCATGTTGCTGCTGGAGAACCACCCAATTCACCTGAACCCTGCTCACTACATTAGTGAGATTATTAGAGAAGGCACAAAAGATGGCACTGCGTTCTTTAGGTGCCATGGCCATGAACAATTTGAGATGACGGGTTTGGACCCTGAGTACAATAGGTTGTTCAATGAGGGGATGGTGTGCACTGCTAGGGTTGTGTCCAAGGCTGTGATCACTGGGTACAAAGATGGGTTCAACCAGATTAAGTCCTTGGTTGATGTGGGAGGTGGCATTGGAGGGTCTCTTTCTGAGATTGTTAGGGCTTACCCTCACATCAATGCCATCAACTTTGACTTGCCTCATGTGGTTGCCACTGCACCTAAGTATGATGGAGTCACCCATGTTGGAGGTGACATGTTTGTGTCCATTCCTAGTGCTGATGCTATTTACATGAAGTGGATTCTGCATGATTGGAGCGACGAGCACTGCATCAAGATTCTGAAGAACTGCAGGAAGGCAATACCAGAGAAGACAGGAAAAGTGATAATCGTGGATCACGTGCTGCGGCCCGAAGGGAACGAACTCTTCACCGACGTTGGCATCGCATTTGACATGATGCTTCTCGCTCACAACGCTGGTGGCAAAGAGAGAACCGAAGAGAACTGGAAGTGGCTATTCAAAGAAACGGGTTTTGCTCGTTACAACATCATCAAGATCAACGCTCTCCCATCCATCATTGAGGCATTTCCAATCTGA 1110 0.4775 METVLFNHSPPLEFKGLSKEEEDSLLGQVEIWRYMTCFTDSVALKSVIELRIADIIDRYGKPLSLSQIVENIEDAPSPDASLLQRVMRVMVRRKIFSAEQSETGETLYGLTRASKWILRDTKMTLAPMLLLENHPIHLNPAHYISEIIREGTKDGTAFFRCHGHEQFEMTGLDPEYNRLFNEGMVCTARVVSKAVITGYKDGFNQIKSLVDVGGGIGGSLSEIVRAYPHINAINFDLPHVVATAPKYDGVTHVGGDMFVSIPSADAIYMKWILHDWSDEHCIKILKNCRKAIPEKTGKVIIVDHVLRPEGNELFTDVGIAFDMMLLAHNAGGKERTEENWKWLFKETGFARYNIIKINALPSIIEAFPI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01106 369 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Pumo11g01106 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
Pumo11g01106 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
Pumo11g01106 369 SUPERFAMILY "Winged helix" DNA-binding domain 24 120 IPR036390 -
Pumo11g01106 369 FunFam O-methyltransferase family protein 119 367 - -
Pumo11g01106 369 PANTHER O-METHYLTRANSFERASE 31 351 IPR016461 GO:0008168
Pumo11g01106 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Pumo11g01106 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Pumo11g01106 369 CDD AdoMet_MTases 209 306 - -
Pumo11g01106 369 Pfam O-methyltransferase domain 143 350 IPR001077 GO:0008171
Pumo11g01106 369 Gene3D - 15 117 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01106 Pumo-Chr11 39451400 39457967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01106 42 355 Monolignol Biosynthesis Gene Families AT5G54160 38.629 5.58e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01106 K22588 - gmx:100800801 735.717