Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01098 ATGGCTCCTGCAGGCCAGAAAAGGCCTCAGAGACCCTTGATTAGTGAAATTGTGGATCTTTCTGAAGTTCTTTTGGATGAAATGTATGTTGGATTTTGTGGGGCAACAGGGCAGCTTGTGGAGAGTCACAAGATTTTGGCTTGGAGCTTTAGTAACTCAAAATTTTCTATTGGTGATGCTTTAGTTACTACAAATTTGCCTTCATTTGTGCTTTCCAAAGAGTCTATTTTGAGGTCAACAGGTTTTATTGTAGGGATCATTACAGGTGTTTTGTTTGTCATTGGTAGTGCTGTTGTGATATTTGTGCTTTTTCTCAGAAGAAAAAGGAGTAAAAGAAAGGATGTAGAAGAAGACATCGAAGATTGGGAACTAGAGTATTGGCCACATCGTGTAAGATATGAAAATATTTATGATGCTACTAAAGGATTTTCAGACCAAAATGTAATTGGGTTTGGAGGGAATGGGAAAGTCTATAAAGGGCTTCTGCAAGGAGTGCAAGTTGCAGTGAAAAGAATTCCTTGTGACAGTGAACATGGATTGAGAGATTTTTTGTCTGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCCATTGAGAGGTTGGTGTAAGAAAGAGAGGAGCTTGATTTTAATCTATGACTATATGGATAATGGGAGTTTAGATAAAAGAATATTTGATGGTGATGAGAACACAATTTTTGGGTGGGAGGAGAGAATCAAGGTGTTGAAGGATGTGGCACATGGAATATTGTATTTGCATGAGGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGATATGAATGCAAGATTGGGGGATTTTGGACTAGCCAGAATGCATCATCATGAGCAAATTGCTCATAGTCATACCTCACAAGTGATTGGAACTGTTGGTTTCATGGCACCTAAACTTATTCACACTGGGAGAGCCTCAACACAGACTGATGTGTTCAGTTTTGGTGTGTTAATTTTAGAGGTGATGTGTGGGAGAAGACCAAATGAAGAAAACAAGCCAGCCTTGGTTACTTGGTTATGGAGGCTAAAGGAGAGAGGAGAAGAGTGTTCTGCTCTTGATGAAAGATTAAAAGGGAGGGGTGAATGTAATATTGATGAGGTTAGGAGGGTGCTTCATCTTGGTTTGTTGTGCACTCATCCTGACCCTCATGTTAGGCCAAGTATGAGACAGGTTGTGAAGGTGCTGGAGGGAGAGAGTTTAGATACGAGCTTGCTTGACAAAATAAATTCAGCAGCTGGATATGTTGGGAGCTTTGGTAACAGCTTTCACCCCACAATTGAGGATATTTACTCCTCCCACTGCTCTTTCACAACTGTGTGA 1371 0.4055 MAPAGQKRPQRPLISEIVDLSEVLLDEMYVGFCGATGQLVESHKILAWSFSNSKFSIGDALVTTNLPSFVLSKESILRSTGFIVGIITGVLFVIGSAVVIFVLFLRRKRSKRKDVEEDIEDWELEYWPHRVRYENIYDATKGFSDQNVIGFGGNGKVYKGLLQGVQVAVKRIPCDSEHGLRDFLSEISSLGRLKHRNVVPLRGWCKKERSLILIYDYMDNGSLDKRIFDGDENTIFGWEERIKVLKDVAHGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHHHEQIAHSHTSQVIGTVGFMAPKLIHTGRASTQTDVFSFGVLILEVMCGRRPNEENKPALVTWLWRLKERGEECSALDERLKGRGECNIDEVRRVLHLGLLCTHPDPHVRPSMRQVVKVLEGESLDTSLLDKINSAAGYVGSFGNSFHPTIEDIYSSHCSFTTV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01098 456 SMART serkin_6 143 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01098 456 Gene3D Transferase(Phosphotransferase) domain 1 218 427 - -
Pumo11g01098 456 Coils Coil 105 125 - -
Pumo11g01098 456 ProSiteProfiles Protein kinase domain profile. 143 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01098 456 CDD TM_EGFR-like 79 113 - -
Pumo11g01098 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Pumo11g01098 456 SUPERFAMILY Protein kinase-like (PK-like) 119 413 IPR011009 -
Pumo11g01098 456 PANTHER - 9 416 - -
Pumo11g01098 456 Pfam Legume lectin domain 2 54 IPR001220 GO:0030246
Pumo11g01098 456 Gene3D Phosphorylase Kinase; domain 1 105 217 - -
Pumo11g01098 456 CDD STKc_IRAK 149 414 - -
Pumo11g01098 456 Pfam Protein kinase domain 144 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01098 456 FunFam L-type lectin-domain containing receptor kinase S.4 218 424 - -
Pumo11g01098 456 ProSitePatterns Protein kinases ATP-binding region signature. 149 170 IPR017441 GO:0005524
Pumo11g01098 456 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 205 IPR013320 -
Pumo11g01098 456 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 103 217 - -
Pumo11g01098 456 Gene3D - 2 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01098 Pumo-Chr11 39345332 39346702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01098 1 363 Receptor kinase-like Gene Family AT4G04960 60.218 1.57e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo11g01098 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01098 - - gmx:100814167 843.188