Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01091 ATGACCACTTCCAATCTCTGCCACGTGCAGCTTCAGTCCCTTCACTTCCACCTCACTGTGCTGGATCTTCTCCATCAGAGAAGAAGTGGCTTACTACAGACTGCCAAATTTGGGGTCAAGAAGCTTTTGCCAGCTTATCTTGATCCAAAACTGCAACCTCAAGATCTCCTCACAGCTGCAAAATTAGGAGTTAAGAATCTTTTACCAGCTTATCTTGATCCAAAATTGCAACCTCAAGATCTCCTCACAGGTGTAAGCTTTGCATCCGGTGGTAACGGATATGATCCTCTAACATCAAAAATTGCATCAGTGCTATCATTATCAGATCAACTAGACAAGTTCAGAGAATACAAAATCAAGATAAATGAAACAGTTGGAGAAAACAGAACGACAACAATAATATCAAAAAGCATATACATCTTGTGCACAGGAAGTAATGACATTGCCAATACTTACTCTCTATCACCATTTAGGCGACCACAATATGACATTCCAGCATACACAGACTTAATGGCTTCACAAGCCACAAACTTCTTGCAGGAACTTTATGGATTAGGAGCTAGAAGGATTGGAGTAATTGGTTTGCCAGTTCTAGGGTGTGTGCCCTTTCAGAGAACAATTCAAGGAGGCATACACAGAGGATGTTCAGATTTTGAAAACCAAGCCGCAATGCTCTTCAACAGCAAGCTCTCATCCCAGATGGATGCCTTTAAAAAACAGTTTCCAGAGGCTAGATTTGTGTACCTTGACATTTACAACCCATTACTCAATATGATTCAAAACGCAACTAAATATGCTGCAAAATTTGGAGTCAAGCGGCTTTTGCCAGCTTATCTTGACCCAAAATTGCAACCTCAAGATCTCCTCACAGGCGTAAGCTTTGCATCTGGTGCTAACGGATATGATCCTCTAACTTCTAAAATAGCATTAGTGCTGTCATTATCAGATCAACTAGACAAGTTCAGGGAATACAAAAACAAGATAACGGAAATAGTTGGAGAAAACAGAACAACAACAATAATATCAAAAAGCATATACATCTTGTGCACAGGAAGTAATGACATTACCAATACTTACTTTCTTAGGCGAGTACAGTATGATATTCAAGCATACACAAACTTAATGGCTTCACAAGCCAGAAACTTCTTGCAGGAACTTTATGGACTAGGAGCTAGACGGATTGGAGTAATTGGTTTGCCGCTTCTAGGGTGCGTGCCCTCACAGAGAACAATTCGTGGAGGCATATACAGAGCATGTTCAGATTTCGAAAACCAAGCCGCAATGCTCTTCAACAGCAAGCTCTCATCCCAAATGGATGCCCTTAAGAAACAATTTCCAGATGCTAGACTTGTCTACCTTGATATTTACAACCCATTACTCTATTTGATTCAAAACCCTGCTAAATATGGTTTTGAAGTAACAGACAAAGGATGCTGTGGCACAGGAGATTTTGAAGTAGGCTTTTTGTGCAACCGTTTCACCCTGGACATATGTCCAAACACCTCAAACTACATATTCTGGGACAGTTTCCATCCTACACAAGAGGCCTATAATGTGCTTTATTTTCTGGTGCTTGATAACAAAATCAAGGACTTCTTCTAA 1602 0.4039 MTTSNLCHVQLQSLHFHLTVLDLLHQRRSGLLQTAKFGVKKLLPAYLDPKLQPQDLLTAAKLGVKNLLPAYLDPKLQPQDLLTGVSFASGGNGYDPLTSKIASVLSLSDQLDKFREYKIKINETVGENRTTTIISKSIYILCTGSNDIANTYSLSPFRRPQYDIPAYTDLMASQATNFLQELYGLGARRIGVIGLPVLGCVPFQRTIQGGIHRGCSDFENQAAMLFNSKLSSQMDAFKKQFPEARFVYLDIYNPLLNMIQNATKYAAKFGVKRLLPAYLDPKLQPQDLLTGVSFASGANGYDPLTSKIALVLSLSDQLDKFREYKNKITEIVGENRTTTIISKSIYILCTGSNDITNTYFLRRVQYDIQAYTNLMASQARNFLQELYGLGARRIGVIGLPLLGCVPSQRTIRGGIYRACSDFENQAAMLFNSKLSSQMDALKKQFPDARLVYLDIYNPLLYLIQNPAKYGFEVTDKGCCGTGDFEVGFLCNRFTLDICPNTSNYIFWDSFHPTQEAYNVLYFLVLDNKIKDFF 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01091 533 Pfam GDSL-like Lipase/Acylhydrolase 269 519 IPR001087 GO:0016788
Pumo11g01091 533 Pfam GDSL-like Lipase/Acylhydrolase 57 267 IPR001087 GO:0016788
Pumo11g01091 533 SUPERFAMILY SGNH hydrolase 345 521 - -
Pumo11g01091 533 FunFam GDSL esterase/lipase APG 57 266 - -
Pumo11g01091 533 Gene3D SGNH hydrolase 54 267 IPR036514 -
Pumo11g01091 533 Gene3D SGNH hydrolase 268 527 IPR036514 -
Pumo11g01091 533 PANTHER GDSL ESTERASE/LIPASE EXL3 266 520 - -
Pumo11g01091 533 CDD SGNH_plant_lipase_like 266 527 IPR035669 -
Pumo11g01091 533 FunFam GDSL esterase/lipase APG 267 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01091 Pumo-Chr11 39292457 39306150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01091 266 520 Pollen Coat Proteome AT1G75910 36.122 2.79e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01091 - - gmx:100809562 471.085