Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01073 ATGGCGTCTGGATCCTCTGGTCGCGGCAACTCTGCCTCCAAAGGCTTCGATTTCGGTTCCGATGACATCCTCTGCTCCTACGACGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACGCCGATCCGGTAATTGCTCCTAATTCAACTGAGGATTTTCACAAAGCAAGGATGGCAAGGACATCAATGTTTCCTACTACTGCCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCAACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATACTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTAACTCGTGACCATGTGGAGCAAGATTCAAGGCTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGACGCTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCTAGCCATTCACAGTCCAATGAGGAGAGATCTTCACCTGCCACAGATCCTAAAAAAACTGATAATACATCTGATGCAAACAACCAGCAGTTGGCTCTTGCCCTGCCTCATCAAATAGCCCCTCAGCCGCAGCCAGCAGCACCCCCAGCTCAGGCTCCTGCACCAAATGTGACTCAAGCCCCTCAACAGCCTCCTTATTACATGCCACCCACCCCTCTGCCAAATCCAGCTGTGCCCCAGCTCCCCCAGAATCAGTATTTACCATCCGATCAACAATATCGAACACCCCAACTTGTGGCTCCACAACCAACACCGTCTCAAGTAACCCCATCCCCTCCTGTGCAACAATTTTCTCACTATCAGCAACCACAGCAACAGCCACAACAGCAGCTGCAGCAACAGCAATGGTCACCGCAGATGCAGCCTCCACAGCCACCCCCAATGCAATCTCAAGTAAGAGCCCCCTCTCCAAATGTGTACCCTCCATACCAGCCAAATCAAGCATCAAACCCATCACCCACAGAAACACTGCCAAACAGCATGGCCATGCAAATGCCATACTCAGGAGTTCCCCCATCAGGATCTAGCCGCGCCGATGCCATACCATATGGATATGGAGGAGCTGGCAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGGGCTCTTTTCCTGCACCACCGGGTGAAATGTATGGACCTACCGGGACCCTCCCGGCACTTCCTCCACCTAGTAGTGCATACATGATGTATGATGGTGAGGGAGGAAGAACACATCATCCACCCCAACCTCATTTTGCTCAACCTGGATATCCCCCAACAAGTGCTTCCCTTCAGAACCCTCCACCAGGCCATAATCTTATGGTCCGAAATCCGAACCAGTCGCAATTTGTCCGCAACCATCCCTATAATGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTTGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTTAACTCAGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1620 0.492 MASGSSGRGNSASKGFDFGSDDILCSYDDYANRDSSSNGNHADPVIAPNSTEDFHKARMARTSMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLTRDHVEQDSRLKSLEKHLQEVHRSVQILRDKQELADAQKELAKLQLAQKESSSSSHSQSNEERSSPATDPKKTDNTSDANNQQLALALPHQIAPQPQPAAPPAQAPAPNVTQAPQQPPYYMPPTPLPNPAVPQLPQNQYLPSDQQYRTPQLVAPQPTPSQVTPSPPVQQFSHYQQPQQQPQQQLQQQQWSPQMQPPQPPPMQSQVRAPSPNVYPPYQPNQASNPSPTETLPNSMAMQMPYSGVPPSGSSRADAIPYGYGGAGRTVPQQPPPQQMKGSFPAPPGEMYGPTGTLPALPPPSSAYMMYDGEGGRTHHPPQPHFAQPGYPPTSASLQNPPPGHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGWSG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01073 539 MobiDBLite consensus disorder prediction 173 206 - -
Pumo11g01073 539 Coils Coil 139 175 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 320 349 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 221 265 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 222 262 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 350 364 - -
Pumo11g01073 539 Pfam UBA-like domain (DUF1421) 485 529 IPR010820 -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 438 458 - -
Pumo11g01073 539 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 539 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 292 319 - -
Pumo11g01073 539 MobiDBLite consensus disorder prediction 277 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01073 Pumo-Chr11 38869349 38875999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01073 484 539 Trihelix Transcription Factor Family AT5G14540 40.000 1.54e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01073 - - gmx:100782994 809.675