Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01054 ATGGCACCCCACAGGTTTCTCGGCCTCTTGATTTTGATGATTCCGATGTTGTTGCTTCTTACCTCTTCTCAAGTTGTGGCAAGGCAATTTGATGTTGGTGGCAAAGATGGGTGGGTGCTGAAACCTGCCGAGGATTACAATCACTGGGCTCAAAGAAACAGGTTTCAAGTCAATGACACTCTCCATTTCAAGTACAACAAAGGTAGTGATTCGGTTGTGGTGGTGAAGAAGGAGGACTTCGATTCATGCAACATCAACAACCCCATACAAAAGATGGAAGATGGTGATTCAACCTTCCAATTTCCCAACTCTGGCTTTTTTAACTTCATAAGTGGCAACCTTGACAACTGCAAAAATGGTCAAAAGCTCATTGTTCTTGTCATGGCTGTGAGGCAGCCACAGCCACAGCCACTTCCCCGTGCCGCGCCTCCGCCGGCAAGCATCCTGCCACCGCAGAAGGTTCCGGAGGCCGGTTTGACTTCTCCGGCGCCACCGCCGTCAGACAAGTCGGGCTCGGGGAGGGTTGGTGTGAGTGTGAGTGTGGGGATTGTTTTGGTGTTCACTGGCTTTGTTGGGTTGGTTTAG 585 0.5026 MAPHRFLGLLILMIPMLLLLTSSQVVARQFDVGGKDGWVLKPAEDYNHWAQRNRFQVNDTLHFKYNKGSDSVVVVKKEDFDSCNINNPIQKMEDGDSTFQFPNSGFFNFISGNLDNCKNGQKLIVLVMAVRQPQPQPLPRAAPPPASILPPQKVPEAGLTSPAPPPSDKSGSGRVGVSVSVGIVLVFTGFVGLV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01054 194 FunFam Early nodulin-like protein 1 27 132 - -
Pumo11g01054 194 Gene3D - 26 131 IPR008972 -
Pumo11g01054 194 MobiDBLite consensus disorder prediction 136 162 - -
Pumo11g01054 194 MobiDBLite consensus disorder prediction 136 173 - -
Pumo11g01054 194 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Pumo11g01054 194 CDD OsENODL1_like 28 128 IPR041846 -
Pumo11g01054 194 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055
Pumo11g01054 194 PANTHER BLUE COPPER PROTEIN 26 141 IPR039391 GO:0009055
Pumo11g01054 194 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01054 Pumo-Chr11 38605450 38606902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01054 10 190 Phytocyanin Superfamily AT4G28365 41.146 1.45e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01054 - - gmx:100803858 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01054 11 38605450 38606902 Pumo11g01054 11 38605450 38606902 ECH