Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01050 ATGGTGAGCAATGGGACAGAGGTTGTGGTTCTTCCCTTCAACACAAGGGTGGAGCTTGTGATGCAGGACACCGGCATTCTTGGTGCTGAAAGTCACCCCCTCCATTTGCATGGCTTTAACTTCTTTGTTGTTGGTCAAGGTTTTGGTAACTTTGACCCAAATAAGGACCCTTCAAACTTCAATCTTGTTGATCCTGTTGAAAGGAACACAGTTGGTGTTCCATCTGGTGGATGGGTTGCAATCAGATTCCTAGCTGATAATCCAGGGGTATGGTTCATGCATTGCCATCTTGAAGTCCACACCAGCTGGGGTCTGAAAATGGCCTGGATTGTGTTGGATGGAAAACTTCCAAATCAGAAGCTGCTTCCACCACCAGCTGATCTTCCAAAGAAAACAGGAGAGAAAGACGTGACATTCAAAGTGTTGTACTGTGGAATATGCCACTCGGACCTTCACAAGTTGAAGAATGAATGGAGTGATTCCATCTATCCACTTGTCCCTAGTCGTGAGATTGTTGGAGAAGTGATAGGGGTGGGAAGCAAAGTGGATAAGTTCAAGGTTGGAGACAAGGTGGTTGTGGGAGTCTTGGTTGGGTCCTTGCCACTCATGCCAAAACTATGTCAACAATCTTGA 633 0.4613 MVSNGTEVVVLPFNTRVELVMQDTGILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPSNFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKLPNQKLLPPPADLPKKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPSREIVGEVIGVGSKVDKFKVGDKVVVGVLVGSLPLMPKLCQQS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01050 210 ProSitePatterns Multicopper oxidases signature 2. 94 105 IPR002355 GO:0005507
Pumo11g01050 210 Pfam Alcohol dehydrogenase GroES-like domain 135 197 IPR013154 -
Pumo11g01050 210 Pfam Multicopper oxidase 3 113 IPR011706 GO:0005507|GO:0016491
Pumo11g01050 210 Gene3D - 1 135 IPR008972 -
Pumo11g01050 210 SUPERFAMILY GroES-like 127 195 IPR011032 -
Pumo11g01050 210 Gene3D - 136 200 - -
Pumo11g01050 210 SUPERFAMILY Cupredoxins 8 134 IPR008972 -
Pumo11g01050 210 ProSitePatterns Multicopper oxidases signature 1. 89 109 IPR033138 -
Pumo11g01050 210 CDD CuRO_3_LCC_plant 1 114 IPR034289 GO:0005507
Pumo11g01050 210 PANTHER MULTI-COPPER OXIDASE 3 122 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01050 Pumo-Chr11 38478932 38483078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01050 118 199 Monolignol Biosynthesis Gene Families AT4G37990 63.415 7.67e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01050 K05909 - tcc:18594769 257.684