Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01049 ATGCAGGCTGCAATGGGCACCTTGGATGGTATAATTGATACTGTTTCTGCAGTCCATCCTATCATGCCTTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAACGGTTGGGGCACCAGAAAAGCCTCTGGAGTTGCTACTCCCACCTTTAATTATGGGGAGAAAAAGTATAGCTGGTAGTTACATTGGAGGAATTAAGGAGACACAAGAAATGATTGATTTTGCTGCTGAACACAATGTTAGACCAGAAATTGAGGTAATTCCTATGGATTATGTGAATACAGCGATGGAACGTCTCCAAAAGGCTGACGTTAAATATCGATTTGTGATTGACATTGGGAACACATTGAAGCCACACTAA 363 0.4105 MQAAMGTLDGIIDTVSAVHPIMPLIDLLKSHGKLVTVGAPEKPLELLLPPLIMGRKSIAGSYIGGIKETQEMIDFAAEHNVRPEIEVIPMDYVNTAMERLQKADVKYRFVIDIGNTLKPH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01049 120 Pfam Zinc-binding dehydrogenase 7 77 IPR013149 -
Pumo11g01049 120 FunFam Putative cinnamyl alcohol dehydrogenase 6 2 83 - -
Pumo11g01049 120 Gene3D - 84 113 - -
Pumo11g01049 120 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 81 IPR036291 -
Pumo11g01049 120 Gene3D - 1 83 - -
Pumo11g01049 120 PANTHER ALDEHYDE REDUCTASE 1 116 IPR047109 GO:0016616
Pumo11g01049 120 FunFam Putative cinnamyl alcohol dehydrogenase 6 84 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01049 Pumo-Chr11 38467875 38469797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01049 1 120 Monolignol Biosynthesis Gene Families AT4G37990 69.167 4.03e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01049 K23232 - gmx:100812491 218.779