Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01046 ATGAATCGGTGGTGGATGGATAATATTCCGGCACCAAAGGATGGTGGAAAAGGAAGAAAATCTTCATCGGCTCAATCAAAGAATAATAATAGTAATAATAATCCTCAAGGGAAGAGAAAAGTCAAGGTGGATTGGACCCCAGAATTGCACAGACGATTCGTGCAAGCTGTGGAACAGCTAGGAGTGGATAAGGCGGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAACATTGCTAGCCACCTTCAAAAATATAGATCTCATAGGAAACATTTGCTAGCACGTGAAGCTGAAGCAGCAAGCTGGAGTCAAAGGAGACAATTGTATGGTGGAGGGAAGAGAGAGGGGAGTCCATGGTTAGCACCCTCTATGGGGTTCCCTCCAATGACTCCAATGCACCATTTTAGACCTCTACATGTATGGGGGCACCCTTCTATGGACCAGTCCTTCATGCACATGTGGTCTAAACATCTTCCACATTCACCACCACTCTCATGGCCACCGGTTGCACCAGCACCACCTCAAGACCCTTCATTTTGGCACCAACGGGCTCCAAACGCACTAATCCCAGGAACAGCTTGTTTTCCACAACCTCTGACACCAACGAGATTTGGAAGTCCCCCTGTCCCCGGCATTCCACCCCATGCCATGTACAAAGCAGATCACGGCATTGGCGTCCCTGGTCCACGTCCCCTATTCGACTTTCATCCGTCAAAGGAGTGCATAGATGCAGCCATTGGAGATGTTTTATCAAAGCCTTGGCTGCCACTACCTATTGGACTTAAGGCTCCAGCGCTTGATAGTGTGATGAGTGAATTACAGAGGCAAGGAATTCCAAACATTCCACCTTCTAGTGCTTGA 879 0.4778 MNRWWMDNIPAPKDGGKGRKSSSAQSKNNNSNNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQLYGGGKREGSPWLAPSMGFPPMTPMHHFRPLHVWGHPSMDQSFMHMWSKHLPHSPPLSWPPVAPAPPQDPSFWHQRAPNALIPGTACFPQPLTPTRFGSPPVPGIPPHAMYKADHGIGVPGPRPLFDFHPSKECIDAAIGDVLSKPWLPLPIGLKAPALDSVMSELQRQGIPNIPPSSA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01046 292 MobiDBLite consensus disorder prediction 19 39 - -
Pumo11g01046 292 MobiDBLite consensus disorder prediction 1 42 - -
Pumo11g01046 292 PANTHER TRANSCRIPTION ACTIVATOR GLK1 13 291 IPR044825 GO:0003700|GO:0045893
Pumo11g01046 292 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 94 IPR006447 GO:0003677
Pumo11g01046 292 FunFam Two-component response regulator 36 99 - -
Pumo11g01046 292 Gene3D - 37 98 - -
Pumo11g01046 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 96 IPR017930 -
Pumo11g01046 292 Pfam Myb-like DNA-binding domain 43 92 IPR001005 -
Pumo11g01046 292 SUPERFAMILY Homeodomain-like 38 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01046 Pumo-Chr11 38428256 38433405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01046 38 243 G2-like Transcription Factor Family AT5G44190 50.220 2.00e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo11g01046 Myb_DNA-binding 3.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01046 - - gmx:100799248 493.426