Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01040 ATGGTGAAGATGAGTCAATTGGTTAGTGTTGATCTTAGTTATAATCAACTTTCTGGTGAACTTAATTTTGGTGGAGTTGGTTACTTGAGTAAGGTCACTGACCTTAATTTGTCACATAATAGTTTTGATGGCAATGTTCCAAGTGAAATAGGAAGTTTGCCTTTGCTTAATTATCTTGATCTTTCTTGGAACAATTTTTCTGGGGAGATTCCTTCGCAGTTGCAGAATTTGAAGCTCTCTGGGCTGAACTTGTCTTACAACCAGCTTTCTGGGGATATTCCTCCTTTTTATGCCAATGACAAGTATAAGATGAGTTTTATAGGGAATCCTGGCCTCTGTGGTGATCTCTCTGGGCTTTGTGATTGTTCTGGTAAGAGTAAGAATCGGAGGTTTGTGTGGATTTTGTGGTCCATATTTGCGCTTGCAGGAGTTGTGTTCATTATTGGGGTGGCATGGTTTTACTTAAGGTACAGGAAGGTGAAGAAATTGAAGAAGGGGTCAAGCATTTCGCGGTGGAAGTCGTTTCACAAGCTGGGGTTTAGTGAGTTTGAGGTTGCAAAGTTGCTGAGTGAGGACAATGTGATAGGAAGTGGAGCTTCAGGGAAGGTGTACAAGGTGGTGCTCAGCAATGGTGAGGTGGTGGCAGTGAAGAGATTGTGTGGAGCACCTATGAATGTAGATGGAAGTGTTGGTTCTAGGAAAGATGAATTTGATGTGGAAGTTGAGACCCTGGGGAGGATCAGGCACAAGAATATTGTGAGGTTGTGGTGTTGCTGCAACAGTGGGGATCACAGGCTACTGGTTTATGAGTACATGCCAAATGGGAGCTTGGCTGATTTGTTAAATGGTAGCAAGAAGAGCTTGTTGGATTGGCCAACTAGGTATAAAATTGCTGTTGATGCTGCTGAGGGGCTTTCTTATTTGCATCATGATTGTGTCCCACCTATTGTTCACAGGGATGTGAAATCTAATAACATATTGGTGGATGAGGAGTTTGTGGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATGGTTACAGGAGTCAGCCAAGGGACACAAACAATGTCTGTGATTGCAGGATCTTATGGCTACATTGCACCAGAATACGCGTACACTCTCCGGGTGAATGAGAAGTGTGACATATATAGCTTTGGAGTGGTCATTTTGGAGTTGGTAACTGGAAGACCCCCAATTGATCCAGAGTATGGTGAAAATGATTTGGTAAAGTGGGTTTCCTCTGCATTGGAACATGAAGGACTGGATCATGTGATTGATCCTTCATTGGACTCCAAATACAAGGAAGAAATCAGCAAAGTATTGAGCGTGGGGCTTCATTGTACCAGCTCCCTCCCAATAACTCGCCCCACAATGAGAAATGTGGTGAAAATGCTTCATGAGGTAACAACAGTTCCCAAAAATGCAGAAGTGTAA 1431 0.4291 MVKMSQLVSVDLSYNQLSGELNFGGVGYLSKVTDLNLSHNSFDGNVPSEIGSLPLLNYLDLSWNNFSGEIPSQLQNLKLSGLNLSYNQLSGDIPPFYANDKYKMSFIGNPGLCGDLSGLCDCSGKSKNRRFVWILWSIFALAGVVFIIGVAWFYLRYRKVKKLKKGSSISRWKSFHKLGFSEFEVAKLLSEDNVIGSGASGKVYKVVLSNGEVVAVKRLCGAPMNVDGSVGSRKDEFDVEVETLGRIRHKNIVRLWCCCNSGDHRLLVYEYMPNGSLADLLNGSKKSLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILVDEEFVAKVADFGVAKMVTGVSQGTQTMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVILELVTGRPPIDPEYGENDLVKWVSSALEHEGLDHVIDPSLDSKYKEEISKVLSVGLHCTSSLPITRPTMRNVVKMLHEVTTVPKNAEV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01040 476 ProSiteProfiles Protein kinase domain profile. 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01040 476 FunFam Uncharacterized protein 156 271 - -
Pumo11g01040 476 Gene3D Transferase(Phosphotransferase) domain 1 272 475 - -
Pumo11g01040 476 Pfam Protein kinase domain 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g01040 476 Gene3D Phosphorylase Kinase; domain 1 156 271 - -
Pumo11g01040 476 Gene3D Ribonuclease Inhibitor 1 131 IPR032675 -
Pumo11g01040 476 SUPERFAMILY L domain-like 4 99 - -
Pumo11g01040 476 Pfam Leucine Rich repeat 55 69 IPR001611 GO:0005515
Pumo11g01040 476 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 31 122 - -
Pumo11g01040 476 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 272 476 - -
Pumo11g01040 476 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Pumo11g01040 476 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 467 - -
Pumo11g01040 476 SUPERFAMILY Protein kinase-like (PK-like) 188 465 IPR011009 -
Pumo11g01040 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Pumo11g01040 476 SMART serkin_6 189 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01040 Pumo-Chr11 38338224 38340289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01040 1 99 Receptor kinase-like Gene Family AT1G28440 35.294 3.49e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo11g01040 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01040 - - gmx:100796415 846.269