Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01031 ATGGAACCCCATAGTGAAGAGAATGCTACAAAATTCATACAACCTCAAAACCTTATTGATGATCATAGTCTCAGATTCATAAACTCTATGTCCCTTAAATGTGCAATTGACTTAAGCATACCAGACATCATACACAAGTATGGCCAACCCATGCCACTCTCAAAACTCATTGCTTCACTACCAATCCACCCATCCAAGACTTGCTTCATCTTCCGCTTGATGCGAATTTTGACTCATTCTGGCTTCTTCTTGCAACACAACGCCCTTGAAAACGAACAAGAAGTGATCAGGTATGAGCTAACTGACGCATCTAGACTACTCCTTAAGGACCACCCTTTTAGTGTGACACCTTTGTTGCTAGTCACACTTGATCCAAGTGTGATTAAGGCATGGTGTCAATTCTCTACTTGGCTCACAAATGAAGACCGTACACCATTCCTCACAGAAAATGGGGTGACATTTTTTGATTATGTTAAGCGTGACCCCAAATTCAGTCACCTTTACAATGATTCCATGGCTAGGGACACTCGATTCATTTCTAGTGTGGTGATTGAGAACTACAAGGAAGTGTTCGAGGGATTAAAGTCGTTAGTTGATGTTGGAGGAGGAACAGGGACTATGGTTAAGGCCATTGCTAAGTCATTCCCACAACTACAATGTACTGTTTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAACTGAGAACATAAAATATGTTGGAGGAGACATGTTTGAAGCCATTCCTTCAGCTGATTCCATTATGTTGAAGTGGGTATTGCATTGTTGGAATGATGAGGAATGCGTGAAAATATTGAAGAAATGCAAGGAGGCAATACCTAACCACGGAAAGGTTATCATCATAGAGTTAGTGGTGGAGCATAATAACAAGGAAGACGACAGTAAATTAATTGAGATGCAGTTGTGCTGTGATATGCTTATGATGTCGCTTTTTGCAGGAAAAGAAAGAACTGAGAAGGAATGGGCCCATCTGATTACCTCTGCTGGTTTCAGTAATAGCTACAAGATAACTCGTGTTTTGGATTTATATCATATCATTGAGGTCTATCCCTAG 1077 0.4076 MEPHSEENATKFIQPQNLIDDHSLRFINSMSLKCAIDLSIPDIIHKYGQPMPLSKLIASLPIHPSKTCFIFRLMRILTHSGFFLQHNALENEQEVIRYELTDASRLLLKDHPFSVTPLLLVTLDPSVIKAWCQFSTWLTNEDRTPFLTENGVTFFDYVKRDPKFSHLYNDSMARDTRFISSVVIENYKEVFEGLKSLVDVGGGTGTMVKAIAKSFPQLQCTVFDLPHVVDGLQGTENIKYVGGDMFEAIPSADSIMLKWVLHCWNDEECVKILKKCKEAIPNHGKVIIIELVVEHNNKEDDSKLIEMQLCCDMLMMSLFAGKERTEKEWAHLITSAGFSNSYKITRVLDLYHIIEVYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01031 358 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Pumo11g01031 358 Pfam O-methyltransferase domain 136 339 IPR001077 GO:0008171
Pumo11g01031 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Pumo11g01031 358 PANTHER O-METHYLTRANSFERASE 29 342 IPR016461 GO:0008168
Pumo11g01031 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Pumo11g01031 358 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pumo11g01031 358 FunFam O-methyltransferase ZRP4 110 358 - -
Pumo11g01031 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Pumo11g01031 358 Gene3D - 2 107 IPR036388 -
Pumo11g01031 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 356 IPR029063 -
Pumo11g01031 358 Gene3D Vaccinia Virus protein VP39 108 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01031 Pumo-Chr11 38227009 38228658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01031 13 340 Monolignol Biosynthesis Gene Families AT5G54160 33.333 5.61e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01031 - K16040 gmx:100795012 620.928