Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01030 ATGCCACTCTCACAACTCACTTCTTCACTATCAATCCACCCTTCCAAAGCCAACTGCATATACCGCTTGATGCGAATTTTGACCCATTCTGGCTTCTTCTCTCAACAGAAGCTCAATGAGAATGAGCTAGAAATGGGTTATGTGCTCACCGATGCATCTATTCTACTCCTTAAGGACAACCCCTTAAGTATGGTACCTTTCCTGCATGCCATGCTTGATCCAGTTTTGACACAGCCATGGCTTCAATTGCTTACATGGTTCAAAAATGATGATCCCTCACCATTTCAAACAGCACATGGGATGAAAATTTGGGATTATGCTGACCGTGAGCCAAAGCTTAATGACCTTTTCAATGATGCTATGGCAAGTGACACTGAATTGGTTGCGAATGTGGTGATTGAGAGGTGCAAGGGAGTGTTCAAGGGATTGGAGTCAATTGTAGATGTTGGGGGAGGCACAGGTACTATGGCTAAGGCAATTGCCAAATCATTCCCACAGCTTGAGTGCACAGTGTTTGATCTCCCACATGTTGTTGCCACTTTACAAGGAAGTGAGAACTTGAAATATGTTGGAGGGGACATGTTTGAGTCAATTCCTCCTGCCGATGCTATTCTCTTAAAGTGGATATTACATGACTGGAATGATGAGCAGTGTGTGAAAATACTGAAGAAGTGCAAGGAGGCAATAAAGAGCAAGGTGATTATCATAGACATGGTGGTGGAGAATGAAAAGGGAGATGATGAATCAATTGAAACACAGCTCTTCATTGATATGGTTGTGATGGTGCTGTATCCTGGAAAAGAGAGAACTGAGAAAGAATGGGCTAAGCTCATTTTCTCTACTGGTTTCAGTGACTACAAGATAACTCCAGTGCTGGGTTTAAGGTCTCTCTTTGAGATTTATCCGTAA 909 0.4279 MPLSQLTSSLSIHPSKANCIYRLMRILTHSGFFSQQKLNENELEMGYVLTDASILLLKDNPLSMVPFLHAMLDPVLTQPWLQLLTWFKNDDPSPFQTAHGMKIWDYADREPKLNDLFNDAMASDTELVANVVIERCKGVFKGLESIVDVGGGTGTMAKAIAKSFPQLECTVFDLPHVVATLQGSENLKYVGGDMFESIPPADAILLKWILHDWNDEQCVKILKKCKEAIKSKVIIIDMVVENEKGDDESIETQLFIDMVVMVLYPGKERTEKEWAKLIFSTGFSDYKITPVLGLRSLFEIYP 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01030 302 SUPERFAMILY "Winged helix" DNA-binding domain 1 61 IPR036390 -
Pumo11g01030 302 Gene3D - 1 56 IPR036388 -
Pumo11g01030 302 Gene3D Vaccinia Virus protein VP39 57 302 IPR029063 -
Pumo11g01030 302 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 302 IPR016461 GO:0008168
Pumo11g01030 302 PANTHER O-METHYLTRANSFERASE 3 287 IPR016461 GO:0008168
Pumo11g01030 302 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 300 IPR029063 -
Pumo11g01030 302 CDD AdoMet_MTases 146 241 - -
Pumo11g01030 302 PIRSF O-mtase 1 302 IPR016461 GO:0008168
Pumo11g01030 302 FunFam O-methyltransferase ZRP4 58 302 - -
Pumo11g01030 302 Pfam O-methyltransferase domain 80 284 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01030 Pumo-Chr11 38218452 38219520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01030 22 288 Monolignol Biosynthesis Gene Families AT5G54160 35.897 8.94e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01030 - K16040 gmx:100794122 587.8