Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01028 ATGGAATCCCATAGTGAAGAGCATGCTACAAAATTGCTTCAAGCTCAAACCCACGTTTGGAATCATATTTTCAAATTCATAAACTCTTTCTCCCTTAAATATGCCGTTGAATTAAGCTTACCAGATATCATGCACAAGTATGGCCAACCCATGCCACTCTCAAAACTCATTGCTTCACTACCAATTCACCCATCCAAGACTTGCTTCATCTACCGCTTGATGCGAATTTTGACTCATTCTGGTTTCTTCTCTCAGCACAATGGCATCGAAAATGAACAAGAAGTGATCAGGTATGAGCTAACTGATGCATCTAGACTACTCCTTAAGGACCATCCCTTTAGTATGACATCTTTGCCCCAAGCCATACTTGATCCAATTTTGGTCAATCCATGGTTTCAATTCTCTACTTGGTTCACAAATGAAGACCCTACACCCTTTCACACACAACATGGGATGACATTATGGGACTTGGCTGGGCGTGAGCCTAAATTCAATCACCTTTTCAATGATGGCATGGCTGGTGATGCTCGATTGGTTTCTAGTGTGATGATTGAGAAGTGCAAGGGGGTGTTTAATGGATTAGAGTCATTGATTGATGTTGGAGGAGGAACAGGGACTATGGCTAAGGTCATTGCTACGTCATTCCCACAACTAAAGTGCATTGTATTTGATCTCCCACATGTTGTTGCTGACTTGCAAGGAACTGAGAACATAAAATACGTTGGAGGGGACATGTTTGAAGCAATTCCTTCCGCTGATTCCATTATGTTGAAGTGGATATTGCATAATTGGAACGACGAGGCGTGTGTGAAAATATTGAATAAATGCAAGGAGGCAATTACTTGCGATGGAAAGGTTATTATCATAGACATGGTGACGGAGAGTAAGAAGGAAGACGATAAATTAGTTGAGACGCAGTTGTTCTTTGATATGCAAATGATGGTAACTCTCACTGGAAAAGAAAGAAATGAGAAAGAATGGGGCAGATTGATTTTCTCTGCGGGTTTCAGTAACTACAAGATAACTCCAGTTCTAGGTTTAAATTCTATCATCGAGGTTTATCCATAG 1068 0.4073 MESHSEEHATKLLQAQTHVWNHIFKFINSFSLKYAVELSLPDIMHKYGQPMPLSKLIASLPIHPSKTCFIYRLMRILTHSGFFSQHNGIENEQEVIRYELTDASRLLLKDHPFSMTSLPQAILDPILVNPWFQFSTWFTNEDPTPFHTQHGMTLWDLAGREPKFNHLFNDGMAGDARLVSSVMIEKCKGVFNGLESLIDVGGGTGTMAKVIATSFPQLKCIVFDLPHVVADLQGTENIKYVGGDMFEAIPSADSIMLKWILHNWNDEACVKILNKCKEAITCDGKVIIIDMVTESKKEDDKLVETQLFFDMQMMVTLTGKERNEKEWGRLIFSAGFSNYKITPVLGLNSIIEVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01028 355 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Pumo11g01028 355 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Pumo11g01028 355 PANTHER O-METHYLTRANSFERASE 12 340 IPR016461 GO:0008168
Pumo11g01028 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Pumo11g01028 355 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Pumo11g01028 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Pumo11g01028 355 Gene3D - 1 107 IPR036388 -
Pumo11g01028 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Pumo11g01028 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Pumo11g01028 355 Pfam O-methyltransferase domain 131 337 IPR001077 GO:0008171
Pumo11g01028 355 FunFam O-methyltransferase ZRP4 109 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01028 Pumo-Chr11 38141235 38143513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01028 30 350 Monolignol Biosynthesis Gene Families AT5G54160 34.969 2.63e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01028 - - gmx:100793263 543.117