Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01022 ATGATGAGAGAAAGTTCCAAGGGCAAGTGTGGATCTTCTTCTCTTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAGATTCAAGGGATTTTCAACAATCTTCAGTGTGCAAGAAAGGAAGGCAGGGGTAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGTTGCTCCGAGAGTGGAAGGCGGAACTGGAGTCTCCAGCCAACTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAATGAACTAGCCCAACTGCTGCAAGTGATTGAGGAGAAAGATGATGCTACTAGTCCATTAACAAAACCTGTGCCATTGAAGACTGAGATCCATACAAATAACATTAGTGACGGCAATTTTCAGTTTTTTCAGGAAAAGCATTTTGATGATAGCCAACCACTAGGTCATACTTTTGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAGCTCAGATATGACACAGTTGGATTATCATCCATTCAGTTTAAATCAAGATATGGTTCACAATCCAGTAGGTCACAACTCTGATTTGATTGGTCAGTTGGATTTATATCAGGACCTCAGGCACAACACAGAAATGAAAAGCTCAGAATCAACTCAATTTAGTTTAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGATGACACTGTGCAGCATGGAGAGAATACTATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCTTAGCCCCAAAATGTGCCCTATGGGACTGTTTCAGACCTGCTCAAGGGGTAGAATGGTGCCAGAACTACTGTAGTAGTTGTCATGAGCTGTTGGCAAATAATGAGGGTCTTCCTGGCATGACTCCAATTTTGCGACCTGGGGGAATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCTAAGACGCAGGGAAAGGAAGTGGGCATCCCTAGTTGTGAAGGCGCTGCTTCAACTAAATCCCCCTGGAAGGCTCCAGAGTTCTTTGATCTCTCTTTTCTTGAGGGTGAAACTGTTAGGGAGTGGCTGTTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAATAGAAAACAGAGATCACTTCCGGATTACAGTGGGCGCGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGGGGACAAAAGAGGTCCTATTACATGGACCCTCAGCCTCTTAGTTATCTCGAGTGGCATTTGTACGAGTACGAGATCAACAACCATGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTGGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACTAAGGAATCTCTTACTGATTTACAGAACAAGATGGGGCAGCTTACTGCTGCTGTTCCATCAATTGATGATGGACAACCAGTCAAGGGAAAAACAAAGGCCAAGCCTGAGAATGATGAATCTCCCAACAAGTAA 1449 0.43 MMRESSKGKCGSSSLQSMKEKEKHLVDKIQGIFNNLQCARKEGRGNDIVIFEEQMHQLLREWKAELESPANSLADGSFDSFTNELAQLLQVIEEKDDATSPLTKPVPLKTEIHTNNISDGNFQFFQEKHFDDSQPLGHTFEGSASTLYNNAFNSSDMTQLDYHPFSLNQDMVHNPVGHNSDLIGQLDLYQDLRHNTEMKSSESTQFSLEGFDCSQFFGADDTVQHGENTIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCQNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWKAPEFFDLSFLEGETVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGQLTAAVPSIDDGQPVKGKTKAKPENDESPNK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01022 482 MobiDBLite consensus disorder prediction 466 482 - -
Pumo11g01022 482 MobiDBLite consensus disorder prediction 360 390 - -
Pumo11g01022 482 MobiDBLite consensus disorder prediction 369 390 - -
Pumo11g01022 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Pumo11g01022 482 MobiDBLite consensus disorder prediction 452 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01022 Pumo-Chr11 37993288 37998137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01022 1 458 VOZ-9 Transcription Factor Family AT1G28520 51.627 7.25e-158 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pumo11g01022 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01022 - - gmx:100808629 910.983