Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01017 ATGCAAAGAAATAATAGTGGAATGCATCCAGCATGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAAAATTGTGTCTTGGCACCTTACTTTCCATCAAACAGAAGCCGTGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATAACCAAGTTGGTAAAGAATGCTAAAGAGGAAGATAGAAGAAGAGTTGTGGACTCATTGATATGGGAAGCATGTTGTAGGCAAAGGGACCCTATACAAGGTCCTTATGGAGAGTACACAAAAGTTTATAATGAGTATAAGAAAGTGTTGGATGAACTTAAGAGATTCAAAAGCCAAAACCATCTTTTGCAATTTCCCTCTCTAGGATTAAAGCCGATACAAGATTTGATTGCTTGCAATGGAACCAAAGGGGAACACAAAGCAGAAGTTGATAATGCGTTGGATTATCTTCATGGGAAAAAGAATGGTATTATTGATTCTGATATTTATAATACTTATTGTTCGAATTATTTGCAAGAGTTCCAGAATATGAGGCCGGAAGTTGTCATACCGTTTCAGCAGCACTCTCAACCATACTATATTACAGATACAATAACAATGGATGGAATAATAAAACAGGATCAAAGCAAGAAAGAATACAGTGGTGACAATAGTAGTGGCATGAGAAATAATGGTGATGGTGATGACAAAAGCGGAGATATGGGTAATAGTAGTGATGAAAATAATAATAGAGATAACACTGATGACCGTGCCAATAATAGTGATTAA 762 0.3701 MQRNNSGMHPACAACKHQRKKCSENCVLAPYFPSNRSREFHAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIQGPYGEYTKVYNEYKKVLDELKRFKSQNHLLQFPSLGLKPIQDLIACNGTKGEHKAEVDNALDYLHGKKNGIIDSDIYNTYCSNYLQEFQNMRPEVVIPFQQHSQPYYITDTITMDGIIKQDQSKKEYSGDNSSGMRNNGDGDDKSGDMGNSSDENNNRDNTDDRANNSD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01017 253 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Pumo11g01017 253 MobiDBLite consensus disorder prediction 205 253 - -
Pumo11g01017 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 203 - -
Pumo11g01017 253 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01017 Pumo-Chr11 37935140 37936077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01017 9 112 AS2 family AT1G06280 54.808 6.18e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo11g01017 LOB 4.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01017 - - gmx:100809173 362.073