Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01013 ATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCAGACTTCTCTTCTCCTCACCAAAAGATGCCTTCCCTCAAAACCATGACACCAAACATGTCATCAAGCCAAAACCCATCATGGGTTGATGAGTTTCTCGACTTCTCGGCGGCGAGGCGCGGGGCCCACCGGCGGTCGGTGAGCGACTCCATCACCTTCTTGGAGGCACCATTGCTGGATCACCATTGCAAAGGTGGCAGTGATGGTGGTGGCGGTGGCGGTGACAACGAGTTCGAGAGGTTCGACGATGAACAATTCATGTCCATGTTTAGTGATGAGAATAATAATAATAATAATAATACCATGATGGCACACACGTTGTCCTCCTCCAACCCTTCTACGCCCTCTGATCACAACAGCATCAATGATGAGAAGGATATGAACAAGGAAAAGGAGGACGAGGAAGAGAAGAAGCAAGTGATGAAGAATGAGTCGGATGATGAGGATGAAAGCCAATGCAAACAAGAAATCACACAACTTATTCCCAACAATGATGATGGTAATAACAATAGTAATGCAAATGGAACAGCTTGTTCTAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCGCAAAGATCAAGAGTTAGGAAGCTGCAATACATATCTGAGCTTGAGCGAAGTGTGACTTCATTACAGGCTGAAGTTTCAGTATTGTCTCCACGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTGAATGTTGACAACAGTGCTTTGAAGCAAAGAATCGCCGCGCTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCATCAACAAAACATAAAGAAGATGGACAATGCTGCAGGCTCAGGCTCACCATCCTCCCAATCCCCATCACCAAAACCACAATGTGATACTCACACTGAAAAGGAACAGCTTATCAATGTTTGA 1008 0.4514 MAQLPPKIPNMTPNWPDFSSPHQKMPSLKTMTPNMSSSQNPSWVDEFLDFSAARRGAHRRSVSDSITFLEAPLLDHHCKGGSDGGGGGGDNEFERFDDEQFMSMFSDENNNNNNNTMMAHTLSSSNPSTPSDHNSINDEKDMNKEKEDEEEKKQVMKNESDDEDESQCKQEITQLIPNNDDGNNNSNANGTACSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNAAGSGSPSSQSPSPKPQCDTHTEKEQLINV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01013 335 FunFam Basic leucine zipper 61 201 274 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 296 335 - -
Pumo11g01013 335 Gene3D - 201 272 - -
Pumo11g01013 335 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Pumo11g01013 335 MobiDBLite consensus disorder prediction 170 196 - -
Pumo11g01013 335 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Pumo11g01013 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Pumo11g01013 335 Coils Coil 139 166 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 104 198 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 298 335 - -
Pumo11g01013 335 PANTHER BASIC LEUCINE ZIPPER 34 1 323 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 134 169 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 104 133 - -
Pumo11g01013 335 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Pumo11g01013 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Pumo11g01013 335 Pfam bZIP transcription factor 202 246 IPR004827 GO:0003700|GO:0006355
Pumo11g01013 335 Coils Coil 281 301 - -
Pumo11g01013 335 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01013 Pumo-Chr11 37908632 37911854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01013 1 279 bZIP Transcription Factor Family AT3G58120 57.566 1.49e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo11g01013 bZIP_2 4.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01013 - - gmx:778128 488.804