Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01009 ATGAGGAGCAGTGTAGGAGATATTGTCCAAGTAGAAGGAGGGCACATTGTTAGGTCCACAGGTAGAAAAGATCGCCACAGCAAGGTCTACACTTCCAAAGGGCCACGCGATCGCCGGGTTAGACTCTCGGCACACACAGCCATTGAGTTCTATGATGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCAAAGACTTCCATTGACAAGCTTGCTGAGCTTCCTCCATGGCATCCACCTACTCATGAGGAAGAGCAGAATGATGCTGCAGGCTCAAGTGGAATCATAGCCATTGCACAAGAACAACAACATCAACAACAATCAGAGTCTAGTGGTTACAACTTTCAGCTCCAAAGGCAATTGGGGGCCTTCATTTCAACCCAAGTTAACACTGACCCCATCAATTTTCAAACCAACAACTCCTCAGAAAATCTTGGCCTATCCCTCCATTGCTTCCAAGACCACCCTGGCCTCATTCATTGGCAATCACAACAAGCAGGTGCAAATCAAACACCTCCTTCAAATGAGCACCAAATTCAAACCCTTTTTGCTGGCTCAACCCCAGTTGGGTTTGAGAACCATTATCAGAGACCTGTGACTTGGAACAATGAAGCAACAACCACAGATCATGTGAACAGGTTGGGGTTCATATTCAACTCACAGCCATTTATAGGCCAAGGTTCTGCTTCAGCTTATGCTCAAAGTGGGGGGACCCTTCAGTCAAGTTTTTCATTTCCAATGACTTCCTCTGAGCATCACAGGTCCCAGCCAGTGAACCAACCTTCCATCTTTGGCAGCAGGTTTGTGTCTGATGGATTAGCTGGTTTCTGCATTCCAGATAGAATTCAAGGTGTGGAAGAGGACCATGGAGTTGCTTCCAATAGGCCATCTTCTTCTCCTAGTTCTATCCATTGA 942 0.4682 MRSSVGDIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKTSIDKLAELPPWHPPTHEEEQNDAAGSSGIIAIAQEQQHQQQSESSGYNFQLQRQLGAFISTQVNTDPINFQTNNSSENLGLSLHCFQDHPGLIHWQSQQAGANQTPPSNEHQIQTLFAGSTPVGFENHYQRPVTWNNEATTTDHVNRLGFIFNSQPFIGQGSASAYAQSGGTLQSSFSFPMTSSEHHRSQPVNQPSIFGSRFVSDGLAGFCIPDRIQGVEEDHGVASNRPSSSPSSIH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01009 313 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Pumo11g01009 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 277 IPR005333 GO:0003700
Pumo11g01009 313 Pfam TCP family transcription factor 21 119 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01009 Pumo-Chr11 37863148 37865365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01009 5 88 TCP Transcription Factor Family AT3G15030 88.095 6.20e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo11g01009 TCP 2.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01009 - - vum:124834546 526.168