Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00997 ATGTTGAAGCACAATAAATTAGGTAGAAAGGTCACTTATCAAACTGAATTGTTCCTCGACAAGAACAAGGATTATGTTGTTGCTGAGCACCAGGCACTTCTTTATGCTTCCAAATGCCCCTTTGTATCGGGCTTGTTTCCCCCTTCACCCGAAGAATCTTCTAAACAATCAAAGTTCTCTTCAATTGGTTCACAATTTAAGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCAGAAGCATTGGATGGAAGTTCTGATGAGGTCACTACTTGCAAGAGAATTCTAAAGAATGTTGGACTTGAAGGCTATCAGGGACCTGCTCAGGCGCAGAATTTGCGGGACTCGCTTGCCGATGCAAAGTCTGATATTGTGGTTAAGGTTGGGCTCAGGAAAGGTTCTCGTTCCTTTAATGAGGCTCGTGCAGCTGGCTTTAGTGAGGAGAATGGAACTCTGGGTGACATATGGGAAACTATCTCAGGCAGTGATCTTGTGTTGCTGTTGATTTCTGATTCTGCACAGGCAGATAATTATGAAAAAATATTTTCCCACATGAAGTCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGGCATTTACAGTCAATGGGACTTGATTTTCCCAAGCACTTCAGTGTAATTGCTGTATGCCCGAAAGGTATGGGTCCTTCTGTAAGGAGGCTGTATGTCCAAGGCAAAGAGATAAATGGTGCTGGAATTAATTCAAGTTTTGCAGTCCACCAGGATGTGGATGGCAGAGCTACTGATGTTGCTTTGGCATGGTCTGTTGCCCTTGGTTCCCCTTTTACATTTGCCACTACATTAGAGATGGAATACAGGAGCATTTTACTTGGTGCTGTTCATGGTATTGTGGAATCCTTGTTTAGGAGGTATACTGAACATGGAATGAGTGAAGATTTGGCTTATAACAACACTGTCGAGTCCATTACAGGAACTATATCTAAAATCATCTCGAGTAAGGGCATGCTGGCTGTATACAATGCTTTATCTGAAGATGAAAAAAGGGAATTTGAGAAAGCATATAGTGCTTCATATTATCCCTGCATGGATATTTTGTATGAATGCTATGAGGATATTGCTGCTGGCAGTGAGATTCGCAGTGTTGTCTTGGCTGGGCGTCGCTTTTATGAGAAAGAGGGTCTGCCAGCTTTTCCCATGGGTAAGATTGATCAGACCCGGATGTGGAAGGTTGGTGAGCGTGTCCGATCTACAAGGCCAGCGGGTGATCTAGGCCCATTATATCCATTTACTGCTGGTGTCTATGTGGCATTGATGATGGCCCAGATTGAGATCCTGAGGAAGAAGGGGCATTCTTACTCTGAAATCATCAACGAGAGTGTCATTGAGTCTGTTGATTCTTTGAATCCTTTCATGCATGCTCGTGGTGTTTCTTTCATGGTTGATAACTGTTCAACCACAGCAAGGTTGGGTTCAAGGAAATGGGCTCCCCGATTTGATTACATCCTAACCCAGCAGGCCTTGGTGGCTGTGGACAATGGTGCACCTATCAACCAAGACCTAATCAGCAACTTCCTGTCAGACCAAGTGCATGGAGCCATTGAAGTTTGTGCCCAACTGAGACCTACAGTAGACATTTCTGTGCCACCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAGTCTAGCAATTAG 1737 0.441 MLKHNKLGRKVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSQFKGVMEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVTTCKRILKNVGLEGYQGPAQAQNLRDSLADAKSDIVVKVGLRKGSRSFNEARAAGFSEENGTLGDIWETISGSDLVLLLISDSAQADNYEKIFSHMKSNSILGLSHGFLLGHLQSMGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATTLEMEYRSILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISSKGMLAVYNALSEDEKREFEKAYSASYYPCMDILYECYEDIAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNGAPINQDLISNFLSDQVHGAIEVCAQLRPTVDISVPPDADFVRPELRQSSN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00997 578 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 292 IPR036291 -
Pumo11g00997 578 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 116 466 IPR013023 GO:0009082|GO:0016491
Pumo11g00997 578 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 122 288 IPR013116 -
Pumo11g00997 578 ProSiteProfiles KARI C-terminal domain profile. 291 436 IPR000506 GO:0004455|GO:0009082
Pumo11g00997 578 Pfam Myosin head (motor domain) 65 121 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00997 578 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 301 575 IPR008927 -
Pumo11g00997 578 Gene3D - 76 289 - -
Pumo11g00997 578 Gene3D - 290 556 IPR013328 GO:0016491
Pumo11g00997 578 Gene3D - 2 74 - -
Pumo11g00997 578 ProSiteProfiles Myosin motor domain profile. 1 67 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00997 578 FunFam Ketol-acid reductoisomerase chloroplastic 173 289 - -
Pumo11g00997 578 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 301 434 IPR000506 GO:0004455|GO:0009082
Pumo11g00997 578 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 447 516 IPR000506 GO:0004455|GO:0009082
Pumo11g00997 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 121 IPR027417 -
Pumo11g00997 578 ProSiteProfiles KARI C-terminal domain profile. 437 573 IPR000506 GO:0004455|GO:0009082
Pumo11g00997 578 ProSiteProfiles KARI N-terminal domain profile. 90 294 IPR013116 -
Pumo11g00997 578 FunFam Ketol-acid reductoisomerase 290 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00997 Pumo-Chr11 37587073 37592655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00997 10 124 Myosins gene family AT1G08730 52.830 1.14e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00997 K00053 - gmx:100789879 873.618