Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00990 ATGGGTTTTCGTTTACCTGGAATCAGAAAGGCATTAATTACAGGAAGTCAAGCATCTTCAAGAGTGGTGCATGTGCCAAAGGGCTATCTTTCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCTGTATCATACTTGAACCAACCTTCATTCCAGGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATTGA 273 0.4212 MGFRLPGIRKALITGSQASSRVVHVPKGYLSVYVGEKMKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00990 90 Pfam Auxin responsive protein 19 89 IPR003676 GO:0009733
Pumo11g00990 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00990 Pumo-Chr11 37429225 37429497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00990 14 89 Calmodulin-binding Proteins AT3G43120 46.053 7.19e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00990 K14488 - gmx:100802934 164.081