Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00989 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATCATTTGCTGCAAACCAAGCATCTTCAAAAGCTGTGGATGTGCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTTATCCCTGTAGCATACTTGTACCAACCTTCTTTTCAAGATTTGTTAAATCAAGCTGAGGAAGAATTTGGGTATGACCATCCAATGGGTGGTCTCACAATACCATGCAAGGAGGATGAGTTCCTAAATGTCACCTCTCACTTGAATGACCTGTAA 279 0.4229 MGFRLPGIRKASFAANQASSKAVDVPKGYLAVYVGEKMKRFVIPVAYLYQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLNVTSHLNDL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00989 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Pumo11g00989 92 Pfam Auxin responsive protein 12 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00989 Pumo-Chr11 37427548 37427826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00989 17 82 Calmodulin-binding Proteins AT3G43120 53.030 5.22e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00989 - K14488 gmx:100786685 174.866