Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00986 ATGGCTACTGAAAAGCTTGGATGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCTACTTGACCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTCAACCAACGCACGAGCCACTATGTCCTAGTAGTTTATCGCCACGCCTTCGCCACCGCCATCATCGCTCCTTTTGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTTCCAGTTTTCATGCAGATTTTTATCCTAGCTCTTCTCAGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACTTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCAGTGTTTTGCCGGATGGAGAAGATAGACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGGGCTATGCTGATGACATTCTACAGAGGTCCTATAGTGGAGATGGTATGGGCCAAACATCCACACAATAAGACCAATGCAACAGCCACCACAGGATCATTGGACAAAGATTGGCTCTTAGGCTGCATCTTTCTCATCATTGCCACCCTTGCTTGGGCTTCCCTGTTTGTTTTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAGCTAAGCCTAAGCTCACTAGTGTGCTTTATAGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATCCTTGTGTATGGAGAATTGGCTGGGATATGAACTTACTTGCAGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTGCAAGGACTGGTAATTAAGAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCAACAAATTTATCTTGGAGGGTAAATTTCTGTTTGTACTCAGCCTGTGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGCTGTAATTGCAGGGCCAATGATTGATGCCACTGATAATTTAACTGAAGAAAAATATGGTCAGAAAGGAGAAGCCAACAATAAGCTCTCTCACTCGTAA 1128 0.4229 MATEKLGCCAKFFASSKPYLTMISLQFGYAGMNIITKVSLNQRTSHYVLVVYRHAFATAIIAPFAFIFERKGQPKITFPVFMQIFILALLRPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKIDIKKVRCIAKIVGTLVTVAGAMLMTFYRGPIVEMVWAKHPHNKTNATATTGSLDKDWLLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLSSLVCFIGTLQAIAVTFVVEHNPCVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAINKFILEGKFLFVLSLWGKHKEQIESKVADEIPLPVKDAQIAVIAGPMIDATDNLTEEKYGQKGEANNKLSHS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00986 375 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Pumo11g00986 375 Pfam EamA-like transporter family 193 311 IPR000620 GO:0016020
Pumo11g00986 375 PANTHER WAT1-RELATED PROTEIN 17 328 IPR030184 GO:0016020|GO:0022857
Pumo11g00986 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00986 Pumo-Chr11 37299534 37302180 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00986 1 372 Nodulin-like Gene Family AT5G07050 61.364 9.30e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00986 - - gmx:100804390 654.825