Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00977 ATGGACTCCGTCGCCGGAGCTCCGTCGTCGCCGGTCCCCGCGACGCCGCGCCCTCCGCCGTCGTTCCCGGCGCGCGAGGACTGCTGGAGCGAGGAGGCGACGTTCACGCTCATCGAGGCGTGGGGCGAGCGCTACCTGGAGCTCAACCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACCGCCGCCACGTCAGCACCTCCACCAAGAAGCCCTTCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACCCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGCCGCCGCCGGCACCTACCGCAGCCCCTGGCCTTTCTTCCCCCGCCTCGACGCCCTCATCGGCCACACTTTTCCGGCCAAAAAAACCTCCCCGCCGGCCAAACCTGCCGCCGCCGCCGGCGTGGATTACCTCCCACCCCGTCGGTCCCCGATCCGGAACGCAGAAACGGCCGGCGCCGGCTGCCGCCAGAGACGACTCGGCCTTCCGCCGGAGTTTCTCGGCGTTTGCCGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGAGCGGCGAGTCGGAGGGGTGGCGGTCAAAGAAGTTGCTCAGGCGATTGAGAGGTTCGGTGAGATATATGAGAGAGTGGAGGGTATGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAGTTCGCTAAGGATTTGGAGTATCAAAGGATGCAGCTCTTCATGGAAACGCAGGTTCAGTTGCAGAAACTCAAGCGCACCAAACATTCTTCTGGAGCTGGTTATACTAGTAGAAGAAGTGCAATGGTTGATATGCTGAACTGA 846 0.6324 MDSVAGAPSSPVPATPRPPPSFPAREDCWSEEATFTLIEAWGERYLELNRGNLRQKHWQEVADAVNRRHVSTSTKKPFRTDVQCKNRIDTLKKKYKIEKARVSDSAAAGTYRSPWPFFPRLDALIGHTFPAKKTSPPAKPAAAAGVDYLPPRRSPIRNAETAGAGCRQRRLGLPPEFLGVCRGGGGGGGGGGERRVGGVAVKEVAQAIERFGEIYERVEGMKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKLKRTKHSSGAGYTSRRSAMVDMLN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00977 281 MobiDBLite consensus disorder prediction 1 26 - -
Pumo11g00977 281 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 15 262 IPR044823 -
Pumo11g00977 281 FunFam trihelix transcription factor ASIL2 29 97 - -
Pumo11g00977 281 Pfam Myb/SANT-like DNA-binding domain 26 124 IPR044822 -
Pumo11g00977 281 Gene3D - 29 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00977 Pumo-Chr11 37140535 37142072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00977 202 271 Trihelix Transcription Factor Family AT3G14180 50.000 4.85e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo11g00977 Myb_DNA-bind_4 5.6e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00977 - - lang:109355153 259.996