Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo11g00974 | ATGGAAGAGACACGAGAAGATGCAGGGCCAGCAGAGCGTAGGCCATCCAACATGTCATGGTGGCCTTCAGATTTGGTTGAAAAATTCGAATCTGTTTCTTTGAGTTCTCAAGAGGAGACCTTAAATAATAAAGAATCACCTAGACATTCTAACCAAGATGTTATGTCACCTCAGAAGGCGTCACAAATTCTGTGGCGCACTGGAATGCTTTCAGAACCAATACCCAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCAAGCTTTGGGTGGAGAGGGCTTTAGGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTAGTTAGAGGATTGAATTCAAATCCACCTGCAATGATTAAGAAGATAGCTGGAGTAGTTTCTGACTTTTATAAGCGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAGGCACGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATGCTGTAGGTCTTGAATGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCTTACAAGCATATGTCAGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGATCAACCAAGTCAATTCTTATGACACATATTTCTGCAGCAGGAGAGAGTGATTCCGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTGTTGAAAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGTGTCTTCAAATGTATCAGGCCTTCCCCTGCGAAATATGATGTTACGATCAAATACCAGTCTGGACAGGAATTTGATTTTTTCTTATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGGGAGCTCATGGGCGGTCCAAGCTTAGTGGTGACAGGACTGCTTTTAGAGATTTTGCTGATGACCAGTCTACACTAAGATCCAGCTATAAGTCAGATGGTGCTTCCTCGTCAGAAGCTCGTAGGATACGAAGAAGAAGTATCAGCATTACACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTCTGAGAGAGCAAGGGGGTGATAGTTCATTGTCCCATTCTCCAATTGATAGAACCAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGACGGTCCCCATGAGAGGTCCCCCTTATATTCGCTACACCATAACCCTGTGACGTCTCAAAAGGCTATGTCATTACCGTCTTCTCCTCATGATTATAGAGGACAAGCTTCTGACAGAAGCGGGACATCAGAATATACAATGAATGATGAACTGGAGTCTACTTGGAATAAAGTCCTTGAATCACCAATGTTCAGTAATAGACCTCTGTTACCATATGAAGAGTGGAATATCGATTTCACAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCCTGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTCATGCGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGAGACATATGCCGGGGCCTAATGCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAACTGTCTTGTGGATAAGCATTGGACAGTGAAAATATGTGATTTTGGACTTTCAAGAATAATAACAGATACTCCCATGAGAGATTCCTCGTCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTAATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTCAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCTTGGGAAGGCGTACCTCCGGAGAGGGTGGTTTATACCGTTGCTAATGAGGGTTCACGATTGGATATTCCTGAAGGCCCGCTAGGAAGGCTGATATCAGAGTGTTGGGCGGAACCACATGAACGGCCAAGTTGTGAGGAGATCGTCTCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA | 2448 | 0.4326 | MEETREDAGPAERRPSNMSWWPSDLVEKFESVSLSSQEETLNNKESPRHSNQDVMSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDELQALGGEGFRADVIVVDAEKDRRLSMLKQLIVALVRGLNSNPPAMIKKIAGVVSDFYKRPNVESPAKAALEESSHMFENRGVQMLGQIRHGSCRPRAILFKVLADAVGLECRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEENLQFHRRFEVSSNVSGLPLRNMMLRSNTSLDRNLIFSYSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSLGAHGRSKLSGDRTAFRDFADDQSTLRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNETLKQNRLLREQGGDSSLSHSPIDRTSSADLQKNVSNFHLDGPHERSPLYSLHHNPVTSQKAMSLPSSPHDYRGQASDRSGTSEYTMNDELESTWNKVLESPMFSNRPLLPYEEWNIDFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHASGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDTPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEIVSRLVDIEYSMS | 815 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo11g00974 | 815 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pumo11g00974 | 815 | CDD | STKc_MAP3K-like | 565 | 807 | - | - | |
Pumo11g00974 | 815 | MobiDBLite | consensus disorder prediction | 495 | 521 | - | - | |
Pumo11g00974 | 815 | ProSitePatterns | Protein kinases ATP-binding region signature. | 565 | 586 | IPR017441 | GO:0005524 | |
Pumo11g00974 | 815 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 327 | 807 | - | - | |
Pumo11g00974 | 815 | Coils | Coil | 429 | 449 | - | - | |
Pumo11g00974 | 815 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 678 | 690 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo11g00974 | 815 | Gene3D | Transferase(Phosphotransferase) domain 1 | 638 | 814 | - | - | |
Pumo11g00974 | 815 | SMART | serkin_6 | 559 | 808 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00974 | 815 | MobiDBLite | consensus disorder prediction | 32 | 58 | - | - | |
Pumo11g00974 | 815 | Gene3D | Phosphorylase Kinase; domain 1 | 552 | 637 | - | - | |
Pumo11g00974 | 815 | MobiDBLite | consensus disorder prediction | 358 | 415 | - | - | |
Pumo11g00974 | 815 | FunFam | Serine/threonine-protein kinase isoform 1 | 549 | 637 | - | - | |
Pumo11g00974 | 815 | MobiDBLite | consensus disorder prediction | 392 | 407 | - | - | |
Pumo11g00974 | 815 | SUPERFAMILY | Protein kinase-like (PK-like) | 533 | 807 | IPR011009 | - | |
Pumo11g00974 | 815 | ProSiteProfiles | Protein kinase domain profile. | 559 | 812 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo11g00974 | 815 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 58 | 253 | - | - | |
Pumo11g00974 | 815 | Pfam | Protein tyrosine and serine/threonine kinase | 560 | 807 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo11g00974 | Pumo-Chr11 | 37092526 | 37105490 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo11g00974 | 1 | 814 | MAP Kinase Kinase Kinase | AT3G58640 | 69.878 | 0.0 | 1168 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL_CTR1-DRK-1 | Pumo11g00974 | PK_Tyr_Ser-Thr | 3.9e-62 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo11g00974 | - | - | gmx:100807193 | 1550.41 |