Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00974 ATGGAAGAGACACGAGAAGATGCAGGGCCAGCAGAGCGTAGGCCATCCAACATGTCATGGTGGCCTTCAGATTTGGTTGAAAAATTCGAATCTGTTTCTTTGAGTTCTCAAGAGGAGACCTTAAATAATAAAGAATCACCTAGACATTCTAACCAAGATGTTATGTCACCTCAGAAGGCGTCACAAATTCTGTGGCGCACTGGAATGCTTTCAGAACCAATACCCAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCAAGCTTTGGGTGGAGAGGGCTTTAGGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTAGTTAGAGGATTGAATTCAAATCCACCTGCAATGATTAAGAAGATAGCTGGAGTAGTTTCTGACTTTTATAAGCGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAGGCACGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATGCTGTAGGTCTTGAATGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCTTACAAGCATATGTCAGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGATCAACCAAGTCAATTCTTATGACACATATTTCTGCAGCAGGAGAGAGTGATTCCGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTGTTGAAAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGTGTCTTCAAATGTATCAGGCCTTCCCCTGCGAAATATGATGTTACGATCAAATACCAGTCTGGACAGGAATTTGATTTTTTCTTATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGGGAGCTCATGGGCGGTCCAAGCTTAGTGGTGACAGGACTGCTTTTAGAGATTTTGCTGATGACCAGTCTACACTAAGATCCAGCTATAAGTCAGATGGTGCTTCCTCGTCAGAAGCTCGTAGGATACGAAGAAGAAGTATCAGCATTACACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTCTGAGAGAGCAAGGGGGTGATAGTTCATTGTCCCATTCTCCAATTGATAGAACCAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGACGGTCCCCATGAGAGGTCCCCCTTATATTCGCTACACCATAACCCTGTGACGTCTCAAAAGGCTATGTCATTACCGTCTTCTCCTCATGATTATAGAGGACAAGCTTCTGACAGAAGCGGGACATCAGAATATACAATGAATGATGAACTGGAGTCTACTTGGAATAAAGTCCTTGAATCACCAATGTTCAGTAATAGACCTCTGTTACCATATGAAGAGTGGAATATCGATTTCACAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCCTGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGATCTTTGTTTTACTTGATTCATGCGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAAGATGTTGCGAGACATATGCCGGGGCCTAATGCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAACTGTCTTGTGGATAAGCATTGGACAGTGAAAATATGTGATTTTGGACTTTCAAGAATAATAACAGATACTCCCATGAGAGATTCCTCGTCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTAATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTCAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCTTGGGAAGGCGTACCTCCGGAGAGGGTGGTTTATACCGTTGCTAATGAGGGTTCACGATTGGATATTCCTGAAGGCCCGCTAGGAAGGCTGATATCAGAGTGTTGGGCGGAACCACATGAACGGCCAAGTTGTGAGGAGATCGTCTCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA 2448 0.4326 MEETREDAGPAERRPSNMSWWPSDLVEKFESVSLSSQEETLNNKESPRHSNQDVMSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDELQALGGEGFRADVIVVDAEKDRRLSMLKQLIVALVRGLNSNPPAMIKKIAGVVSDFYKRPNVESPAKAALEESSHMFENRGVQMLGQIRHGSCRPRAILFKVLADAVGLECRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVEKEENLQFHRRFEVSSNVSGLPLRNMMLRSNTSLDRNLIFSYSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSLGAHGRSKLSGDRTAFRDFADDQSTLRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNETLKQNRLLREQGGDSSLSHSPIDRTSSADLQKNVSNFHLDGPHERSPLYSLHHNPVTSQKAMSLPSSPHDYRGQASDRSGTSEYTMNDELESTWNKVLESPMFSNRPLLPYEEWNIDFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHASGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDTPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEIVSRLVDIEYSMS 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00974 815 MobiDBLite consensus disorder prediction 1 20 - -
Pumo11g00974 815 CDD STKc_MAP3K-like 565 807 - -
Pumo11g00974 815 MobiDBLite consensus disorder prediction 495 521 - -
Pumo11g00974 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Pumo11g00974 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 327 807 - -
Pumo11g00974 815 Coils Coil 429 449 - -
Pumo11g00974 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Pumo11g00974 815 Gene3D Transferase(Phosphotransferase) domain 1 638 814 - -
Pumo11g00974 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00974 815 MobiDBLite consensus disorder prediction 32 58 - -
Pumo11g00974 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Pumo11g00974 815 MobiDBLite consensus disorder prediction 358 415 - -
Pumo11g00974 815 FunFam Serine/threonine-protein kinase isoform 1 549 637 - -
Pumo11g00974 815 MobiDBLite consensus disorder prediction 392 407 - -
Pumo11g00974 815 SUPERFAMILY Protein kinase-like (PK-like) 533 807 IPR011009 -
Pumo11g00974 815 ProSiteProfiles Protein kinase domain profile. 559 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo11g00974 815 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Pumo11g00974 815 Pfam Protein tyrosine and serine/threonine kinase 560 807 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00974 Pumo-Chr11 37092526 37105490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00974 1 814 MAP Kinase Kinase Kinase AT3G58640 69.878 0.0 1168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Pumo11g00974 PK_Tyr_Ser-Thr 3.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00974 - - gmx:100807193 1550.41