Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00968 ATGTTTCCTAGAACTTTTGCCCAAAAGCTGTATCAGACCTTAAAAAACCATATAAGGTTTAGCAAGCCTGAATTATCACGAAGTGACTTCACAATTTGCCATTATGCTGGAGATATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAACTAGATAGCCGTAATAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAAAAGTTCGTTCCTATTTGGCCCGCCAAAGTTTCATCTTGCTTCGGTTGTTTGCTGTGCGGATCCAAGCTACGTGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCGGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACAAAGATTTGTATACCTCTGCTGTCTCTATCCAGACTGGTATGCTGGGGATGGCTGCTCGTTGTGAGCTAGACTTTAGAAGGCGGACTAAAGCAGCAATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAACTTCATTTCACAGAATTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTGCGAAAGCTCAAGATGGATACATTTGTTACACCTGTGAAACAATTTGGTACAGAACCAGACACTAAATTGAGAATATCTTACATTGAACGACAACATGAGAGTGTTGATTCACTTGTCAATTGCGTTGTGAAAAATATTGGCTTCAATCATGGAAAACCCATTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACCAGTGTATTTGATCGCCTTATCCAAATGATTGGTTCTGAAATTGAGAATCAAGATGGCAATGATCATATGGCCTATTGGCTGTCAAATACATCTGCGTTAGTGTTTTTACTTGAACAAAGCCTGAAATCTGGGAGCTCAGCAAATGCTACGCCAGCTAGAAAACCGGCTAATCCAACATCCCTCTTTGGAAGAATGACTACGAGTTTTCTTTCATCCCCTTCTTCTGCCAACCTTGCTGCTCCTCCATATGAAGTTGTACTCAAGGTAGAGGCTAAATACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCTTATTTGGAGAAAATATATGGCATCATTCAGGATAAGTTCAAGAAGGATTTAACACCAGTTCTTGCATTATGCATTCAGGCACCAAGAACATCAAAGGGAGGGTTACGTTCTGGCCGATCCTTGGCCAAAGATTCCCCAATGGTTCACTGGCAGAGTATTATTGAATCCCTCAATACCCTCCTCTGTACACTGAAAGAGAATTTTGTGCCACCAGTTCTTATCCAAAAGATCTTCAGTCAAACATTTTCATATATTAATGTGCAACTCTTCAATAGTCTTCTTCTTCGTCGCGATCGTTGCACATTCAGCTATGGGCAATATGTGGAAGCTGGCTTAGCTGAATTAGAGCTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAACTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAGATCATCAATGATTTATGCCCTATCTTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGGTAACTACAATACTCAAAGTGTATCTCCTCCAGATGTCCTTTCAAGCATGAGAATGTTAATGGCTGAGGACTCCAATAATGCTCAGAGCGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGATCTCTCTACATCAGTGCAAGAGAAGGATTTCTCTGACATGAAACCAACTGACGAGCTTCTCGAGAATCCAGCCTTCGAATTCTTAAACGAGTAG 1908 0.4224 MFPRTFAQKLYQTLKNHIRFSKPELSRSDFTICHYAGDIGKTKVFLRAGQMAELDSRNSEILGRSASIIQRKVRSYLARQSFILLRLFAVRIQATCRGQLARQVYEGMRQEASSLVIRRCFRMHIARKAYKDLYTSAVSIQTGMLGMAARCELDFRRRTKAAIVIQSHCRKYLAQLHFTELKKAAITTQCAWRGKVARRELRKLKMDTFVTPVKQFGTEPDTKLRISYIERQHESVDSLVNCVVKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDGNDHMAYWLSNTSALVFLLEQSLKSGSSANATPARKPANPTSLFGRMTTSFLSSPSSANLAAPPYEVVLKVEAKYPALLFKQQLTAYLEKIYGIIQDKFKKDLTPVLALCIQAPRTSKGGLRSGRSLAKDSPMVHWQSIIESLNTLLCTLKENFVPPVLIQKIFSQTFSYINVQLFNSLLLRRDRCTFSYGQYVEAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDGNYNTQSVSPPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSVQEKDFSDMKPTDELLENPAFEFLNE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00968 635 FunFam Myosin XI D 62 111 - -
Pumo11g00968 635 CDD MyosinXI_CBD 230 604 IPR037975 GO:0007015
Pumo11g00968 635 Gene3D - 25 104 - -
Pumo11g00968 635 PANTHER MYOSIN 4 38 - -
Pumo11g00968 635 SMART iq_5 180 202 IPR000048 GO:0005515
Pumo11g00968 635 SMART iq_5 157 179 IPR000048 GO:0005515
Pumo11g00968 635 SMART iq_5 84 106 IPR000048 GO:0005515
Pumo11g00968 635 SMART iq_5 61 83 IPR000048 GO:0005515
Pumo11g00968 635 SMART iq_5 109 131 IPR000048 GO:0005515
Pumo11g00968 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 112 IPR027417 -
Pumo11g00968 635 ProSiteProfiles IQ motif profile. 158 187 IPR000048 GO:0005515
Pumo11g00968 635 ProSiteProfiles IQ motif profile. 181 208 IPR000048 GO:0005515
Pumo11g00968 635 SMART DIL_2 455 562 IPR002710 -
Pumo11g00968 635 FunFam unconventional myosin-Va 160 208 - -
Pumo11g00968 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 210 IPR027417 -
Pumo11g00968 635 ProSiteProfiles IQ motif profile. 110 139 IPR000048 GO:0005515
Pumo11g00968 635 ProSiteProfiles IQ motif profile. 85 114 IPR000048 GO:0005515
Pumo11g00968 635 ProSiteProfiles Dilute domain profile. 279 581 IPR002710 -
Pumo11g00968 635 Pfam IQ calmodulin-binding motif 64 82 IPR000048 GO:0005515
Pumo11g00968 635 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Pumo11g00968 635 Pfam IQ calmodulin-binding motif 183 202 IPR000048 GO:0005515
Pumo11g00968 635 Pfam IQ calmodulin-binding motif 159 178 IPR000048 GO:0005515
Pumo11g00968 635 Pfam IQ calmodulin-binding motif 89 105 IPR000048 GO:0005515
Pumo11g00968 635 Pfam DIL domain 455 558 IPR002710 -
Pumo11g00968 635 Gene3D - 109 159 - -
Pumo11g00968 635 Gene3D - 160 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00968 Pumo-Chr11 36862972 36869484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00968 215 634 Myosins gene family AT5G43900 70.118 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00968 K10357 - gmx:100795648 785.023