Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00959 ATGGCTTCCCTTAACAACTTCTTTGTTATAGTATCTATTCTTTCTCTCTTAGCCTTTTCTAGCAATGCACAACTATCTCCCAACTTTTATGCGCTCAGTTGCCCCAACCTTCAAGCCATAGTGCAGGGTACAATGAGTGCAGCTATTGCTAGAGAAGCCAGGCTTGGTGCCTCTATACTTCGCTTGTTCTTTCATGATTGCTTTGTAAATGTAAACCCTCTAGCTACCCTTGGCTGTGATGCATCAATCTTATTGGACGACACTGCCACCTTCACCGGGGAGAAAAATGCAGAACCTAACCAAAATTCAGCGAGGGGCTTTGAAGTTATTGATAACATTAAAGCCAGCGTTGAAGCTGCTTGCCCTGGAGTCGTGTCTTGTGCGGATATTCTAGCACTTGCCGCAAGAGATGGAGTGTTTCTGCTAGGAGGACCCTCATGGGCAGTCCCTCTTGGGAGAAGAGATGCAAGAACTGCAGACCAGAGTGCAGCCAACAGTGACATCCCTTTACCATCCTCTGACCTCTCCACCCTCATATCCATGTTTGCAGCCAAAGGCCTAAGCTCACGTGACATGACCGCGCTCTCGGGAGGCCACACCATAGGCCAAGCCCAGTGCCGATTCTTCAGGGATCGCATATACAACGACGCCAACTTTGCCACCGCTAGAAGGGCCGATTGCCCTGCCTCTGATGGGGACTCCAACCTGGCCCCTCTTGACACCCTCACCCCAACCCTTTTTGACAATAGTTACTACACTAACCTTCTGAACAGTCGTGGCCTTCTCCACTCTGACCAAGAGCTTCTCGATGGTGGGTCTCTGGTCCTAAATGCCTTGGTGAGGACTTATAGTCTCAGTAATGCTGTCTTTTTCAGTGACTTTTCTTCTGCTATGGTGAGGTTGGGCAATATTAGTCCTCTCACTGGGAGCACCAGGCTTGGTGCCTCTATACTTCGCTTGTTCTTTCATGATTGCTTTGTAAATGGCTGTGATGCATCAATCTTATTGGACGACACTGCCACCTTCACCGGGGAGAAAAATGCAGAACCTAACCAAAATTCAGCGAGGGGCTTTGAAGTTATTGATAACATTAAAGCCAGCGTTGAAGCTGCTTGCCCTGGAGTCGTGTCTTGTGCGGATATTCTAGCACTTGCCGCAAGAGATGGAGTGTTTCTGCTAGGAGGACCCTCATGGGCAGTCCCTCTTGGGAGAAGAGATGCAAGAACTGCAGACCAGAGTGCAGCCAACAGTGACATCCCTTTACCATCCTCTGACCTCTCCACCCTCATATCCATGTTTGCAGCCAAAGGCCTAAGCTCACGTGACATGACCGCGCTCTCGGGAGGCCACACCATAGGCCAAGCCCAGTGCCGATTCTTCAGGGATCGCATATACAACGACGCCAACTTTGCCACCGCTAGAAGGGCCGATTGCCCTGCCTCTGATGGGGACTCCAACCTGGCCCCTCTTGACACCCTCACCCCAACCCTTTTTGACAATAGTTACTACACTAACCTTCTGAACAGTCGTGGCCTTCTCCACTCTGACCAAGAGCTTCTCGATGGTGGGTCTCTGGTCCTAAATGCCTTGGTGAGGACTTATAGTCTCAGTAATGCTGTCTTTTTCAGTGACTTTTCTTCTGCTATGGTGAGGTTGGGCAATATTAGTCCTCTCACTGGGAGCAGTGGGGAGATCAGATTGAATTGCAGGGTTCTGATGATGTCAATAACTGCTGTTGATATTAAACCAGCGCATATCTCGTCTTGA 1767 0.4963 MASLNNFFVIVSILSLLAFSSNAQLSPNFYALSCPNLQAIVQGTMSAAIAREARLGASILRLFFHDCFVNVNPLATLGCDASILLDDTATFTGEKNAEPNQNSARGFEVIDNIKASVEAACPGVVSCADILALAARDGVFLLGGPSWAVPLGRRDARTADQSAANSDIPLPSSDLSTLISMFAAKGLSSRDMTALSGGHTIGQAQCRFFRDRIYNDANFATARRADCPASDGDSNLAPLDTLTPTLFDNSYYTNLLNSRGLLHSDQELLDGGSLVLNALVRTYSLSNAVFFSDFSSAMVRLGNISPLTGSTRLGASILRLFFHDCFVNGCDASILLDDTATFTGEKNAEPNQNSARGFEVIDNIKASVEAACPGVVSCADILALAARDGVFLLGGPSWAVPLGRRDARTADQSAANSDIPLPSSDLSTLISMFAAKGLSSRDMTALSGGHTIGQAQCRFFRDRIYNDANFATARRADCPASDGDSNLAPLDTLTPTLFDNSYYTNLLNSRGLLHSDQELLDGGSLVLNALVRTYSLSNAVFFSDFSSAMVRLGNISPLTGSSGEIRLNCRVLMMSITAVDIKPAHISS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00959 588 Pfam Peroxidase 310 534 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 SUPERFAMILY Heme-dependent peroxidases 24 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 Gene3D - 311 570 - -
Pumo11g00959 588 ProSitePatterns Peroxidases active site signature. 314 325 IPR019794 GO:0004601
Pumo11g00959 588 FunFam Peroxidase 28 177 - -
Pumo11g00959 588 SUPERFAMILY Heme-dependent peroxidases 310 572 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 FunFam Peroxidase 169 301 - -
Pumo11g00959 588 PANTHER PEROXIDASE 72-RELATED 22 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 Gene3D Peroxidase, domain 2 420 552 - -
Pumo11g00959 588 Gene3D Peroxidase, domain 2 169 301 - -
Pumo11g00959 588 CDD secretory_peroxidase 312 571 IPR033905 GO:0004601|GO:0042744
Pumo11g00959 588 FunFam Peroxidase 420 552 - -
Pumo11g00959 588 PRINTS Haem peroxidase superfamily signature 491 506 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Haem peroxidase superfamily signature 376 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Haem peroxidase superfamily signature 314 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Haem peroxidase superfamily signature 394 406 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 PRINTS Haem peroxidase superfamily signature 442 457 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 ProSitePatterns Peroxidases proximal heme-ligand signature. 442 452 IPR019793 -
Pumo11g00959 588 CDD secretory_peroxidase 24 310 IPR033905 GO:0004601|GO:0042744
Pumo11g00959 588 ProSiteProfiles Plant heme peroxidase family profile. 312 573 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo11g00959 588 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Pumo11g00959 588 Gene3D - 28 310 - -
Pumo11g00959 588 ProSiteProfiles Plant heme peroxidase family profile. 24 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00959 Pumo-Chr11 36718838 36741560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00959 305 569 Peroxidase AT5G05340 65.314 9.41e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00959 K00430 - gmx:100810392 452.21