Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00954 ATGATGTCCAGGTCGTATACCAATCTTTTAGATTTGGCCTCCGGGAATTTCCCGGCAATGGGGAGGGAGACTAGGGAGCGGAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGTTTCTCACTGAGGTAGATGATGATCAGCCAGTTAGTGTTTCCTCTGATAATCCGTCGACTGTTACTACGGATAGAATGATCATTGTGGCTAACCAGCTACCATTGAAGGCAAAGAGAAAAGAGGACAACAAAGGGTGGAGTTTCAGTTGGAATGAGGATTCATTGCTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAGGTTCTTTATGTTGGCTCGTTACGCGTTGACATTGATCCAGCGGAACAGGATGACGTATCACAGTATTTATTGGATAAATTCAAATGTGTGCCGACTTTTTTACCTGCTGACGTTTTGGCAAAATTTTATGATGGCTTCTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTACCATTTTCAACAGATAAAAGCCACCGATTTGATCGCTCTTTGTGGGAAGCTTATGTGCTGGCAAACAAGCTATTTTTTCAGAAGGTAGTTGAAATAATAAACCCAGAGGATGATTACATTTGGATTCATGATTATCATTTAATGGTGCTGCCAACTTTTTTAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAGATATATAGGACTCTTCCAGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATCGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGAGTCAGTTATGAGAATGGCAGATGAGGAATGCAAGGTAAGGGAGCTCAAACAGCAATTCGAAGGAAAAACCATCTTGCTTGGTATTGACGATATGGACATTTTTAAAGGCATAAATTTAAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATTCCAAATGGAAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCCAGAGGTAAAGGGATACATCTGGAGGAGATACATGCTGAAATACAAGAAAGCAGCAACAGGATCAACAGAGAGTTTGGTCGACCTGGTTACGAACCTATTGTTTTTATTGATAGAGCAGTTCCTATTGCTGAAAAAGTTGCCTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAATCTAACTCCTTATGAGTATATTGCATGTAGACAAGGAATATCTGGTTCTGAATCATGTTCCAATGTCAGTGACCCAAAGAAGAGTATGCTAGTAATATCAGAATTTATTGGTTGTTCTCCATCGCTTAGCGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCCATCTCAATGGGTGATGGAGAGAAACAGTTGCGGCATGAGAAACATTACCGGTATGTCAGCACTCATGATGTGGCTTACTGGTCACGAAGTTTCTTGCAAGACATGGAGCGGGCTTGCACAGACCTTCTGAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCTATTTTGTTGGACTATGATGGTACTGTGATGCCACAGAACTCCATTAATAAGAGTCCAAGCAAGGAAGTCTTGTCTATTATGGAATCACTTAGTGCAGACCCCAAAAATGTTGTTTTCATTGTTAGTGGACGGGGGAGGAATAGCTTAAGTGAATGGTTTGATCCCTGCAAAAAACTTGGAATTGCTGCCGAACATGGGTACTTCTTGAGATGGTTCCACAATGGAGCATGGGAAATTTGTGGTAAGAGCTCCGACTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCCTCAATTGAAAGAAAAGAAAGTGCTTTGGTCTGGCAATACCGTGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTGGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGCGGCCAGTTTATTGTTGAAGTAAAACCCCAGGATGTGAGCAAAGGCTTGGTCGCGGAAAGGATATTTTCGTCAATGGAAGGGAAGGGCAAACTGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAGATAGTTAGCAGTGCCATCTCAAGGAATATTCTTGCCACCAATGCTTCTGTGTTTGCTTGCACGGTTGGACAAAAACCAAGCAAAGCAAAGTATTATCTGGATGATACAACTGAGGTAACAAGCATGCTAGAATCTTTGGCTGAAGAATCAGATTCTTCACCCTGCATAGAAGAAACTGGGGACCCCTCTTGGAGGCAAGTGTGA 2586 0.4258 MMSRSYTNLLDLASGNFPAMGRETRERRRMPRVMSVPGFLTEVDDDQPVSVSSDNPSTVTTDRMIIVANQLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRSLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLRQHSKWKGRAVLVQIVNPARGKGIHLEEIHAEIQESSNRINREFGRPGYEPIVFIDRAVPIAEKVAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISGSESCSNVSDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMGDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPKNVVFIVSGRGRNSLSEWFDPCKKLGIAAEHGYFLRWFHNGAWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMEGKGKLADFVLCVGDDRSDEDMFEIVSSAISRNILATNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIEETGDPSWRQV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00954 861 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Pumo11g00954 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Pumo11g00954 861 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Pumo11g00954 861 Gene3D Glycogen Phosphorylase B; 317 530 - -
Pumo11g00954 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Pumo11g00954 861 NCBIfam trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Pumo11g00954 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Pumo11g00954 861 NCBIfam HAD-IIB family hydrolase 595 799 IPR006379 -
Pumo11g00954 861 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Pumo11g00954 861 MobiDBLite consensus disorder prediction 839 861 - -
Pumo11g00954 861 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Pumo11g00954 861 Gene3D Glycogen Phosphorylase B; 56 316 - -
Pumo11g00954 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Pumo11g00954 861 Gene3D - 721 850 IPR023214 -
Pumo11g00954 861 Gene3D - 592 692 IPR023214 -
Pumo11g00954 861 SUPERFAMILY HAD-like 593 841 IPR036412 -
Pumo11g00954 861 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Pumo11g00954 861 CDD HAD_TPP 594 833 - -
Pumo11g00954 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00954 Pumo-Chr11 36657838 36662936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00954 1 847 Trehalose Biosynthesis Gene Families AT1G06410 78.630 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00954 K16055 - gmx:100800847 1652.88