Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00950 ATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCAGAAGCATTGGATGGAAGTTCTGATGAGGTCAATACTTGCAAGAGAATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAACTAGATACCTGTAGAAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAAAAGTTCGTTCCTATGTGGTCCGCCAAAGTTTCATCTTGCTTCGGTTGTTTGCTATGCAGATCCAAGCTACGTGCAGAGGACAACTTGCTCCGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCGGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACAAAGATTTGTATACCTCTGCTGTCTCTATCCAGACTGGTATGCTGGGGATGGCTGCTCGTTGTGAGCTAGACTTTAGAAGGCGGACTAAAGCAGCAATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAACTTCATTTCACAGAATTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTGCGAAAGCTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTAAGGTTGCAGCTGGAAAAGCGTTTGAGGGTTGACATGGAAGAAGCAAAAGCACAAGAAAATCAAAGATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAAGTCAGTTACTTCTTGAAAAGGAGAGGGAGGCTACAAAAAGAGCAGCAGAGAGAGCGCCTGTCATACAGGAGGTTCCAGTTGTTGACCATGCTTTGTTGGAGAAGCTCAGTAGTGAGAATGAGAAACTCAAGGTGAAGTGGTTATGGCATAGATATCTGTGCTTCATTTCAAGAAAGTATTTGTATATTGATACACTTAGATATCCTCACATTTTGAGTAAGATATATTGCCATATTGTGTTATTAAGATAG 1101 0.4242 MEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVNTCKRILKNVGLEGYQIGKTKVFLRAGQMAELDTCRSEILGRSASIIQRKVRSYVVRQSFILLRLFAMQIQATCRGQLAPQVYEGMRQEASSLVIRRCFRMHIARKAYKDLYTSAVSIQTGMLGMAARCELDFRRRTKAAIVIQSHCRKYLAQLHFTELKKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDMEEAKAQENQRLQSALQEMQLQFKESQLLLEKEREATKRAAERAPVIQEVPVVDHALLEKLSSENEKLKVKWLWHRYLCFISRKYLYIDTLRYPHILSKIYCHIVLLR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00950 366 Pfam IQ calmodulin-binding motif 81 99 IPR000048 GO:0005515
Pumo11g00950 366 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
Pumo11g00950 366 Pfam IQ calmodulin-binding motif 200 219 IPR000048 GO:0005515
Pumo11g00950 366 Pfam IQ calmodulin-binding motif 176 195 IPR000048 GO:0005515
Pumo11g00950 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 130 IPR027417 -
Pumo11g00950 366 ProSiteProfiles IQ motif profile. 127 156 IPR000048 GO:0005515
Pumo11g00950 366 Coils Coil 221 294 - -
Pumo11g00950 366 Gene3D - 79 128 - -
Pumo11g00950 366 Gene3D - 129 176 - -
Pumo11g00950 366 Gene3D - 177 226 - -
Pumo11g00950 366 PANTHER MYOSIN 1 302 - -
Pumo11g00950 366 ProSiteProfiles IQ motif profile. 102 131 IPR000048 GO:0005515
Pumo11g00950 366 SMART iq_5 126 148 IPR000048 GO:0005515
Pumo11g00950 366 SMART iq_5 78 100 IPR000048 GO:0005515
Pumo11g00950 366 SMART iq_5 174 196 IPR000048 GO:0005515
Pumo11g00950 366 SMART iq_5 197 219 IPR000048 GO:0005515
Pumo11g00950 366 SMART iq_5 101 123 IPR000048 GO:0005515
Pumo11g00950 366 ProSiteProfiles IQ motif profile. 175 204 IPR000048 GO:0005515
Pumo11g00950 366 FunFam unconventional myosin-Va 177 225 - -
Pumo11g00950 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 227 IPR027417 -
Pumo11g00950 366 Pfam Myosin head (motor domain) 1 64 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00950 366 ProSiteProfiles IQ motif profile. 198 227 IPR000048 GO:0005515
Pumo11g00950 366 ProSiteProfiles Myosin motor domain profile. 1 76 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo11g00950 366 Gene3D - 10 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00950 Pumo-Chr11 36574118 36577234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00950 1 327 Myosins gene family AT5G43900 70.031 1.09e-149 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00950 K10357 - gmx:100795648 556.599