Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00931 ATGGCTTCTAAGGCCATCATCCAATGCAACTCTTCTTCATCTCATGTGATGAGGACATATGATGTGTTTGTGAGCTTCCGCGGTGAAGACACACGTAACAACATCACTGATCTTCTCCTTGGAACTCTCGGTAGTAAAGGCATTGATGTCTTCAAAGATAATGAAGATCTCAGGAAAGGCGAATCCATAGCACCCGAGCTGCTACAAGCTATTCAAGGGTCTCGCATTTTCGTTGTGGTCTTCTCAAAGAACTATGCTTCCTCAACTTGGTGTTTACATGAACTAGCACACATCTGCAATTGCATTGAAACATCCGAAAGGAGTGTTCTGCCTATTTTTTATGATGTTGATCCATCAGACGTGCGAAAACAGAGTGGATGTTATGAGAAAGCCTTTGCCGAATATGAAGAAAGATTCAGACAAGACAAAGAGAAGATGGAGGAAGTGAAGACATGGAGAGAAGCACTGACAAAAGTGGCCAATCATGGTGGTTGGGATATCCGAAATAAGCCACTGTATACAGAGACAGAACAAATTGTTCGAAAGATAACAAATATGTTGGGTCATAAATTTTCAAGTCTTCCAAAAGATAATCTAGTTGGGATGGAATCTCGTGTTAAAGAATTAGTAAAGTGTTTATGTTTGGGGTCGGCTAATGATGTTCGAGTTGTTGGAATTAGTGGAATGAGTGGAATAGGAAAGACGACTCTTGCTCGTGCTTTGTATGAAAAAATCTTTGATAAATTTGATTTTCATTGTCTTATTGATGATGTAAGCAAAATTTATCAAGATTCTGGTGCATTAGGGGTACAAAAACAATTACTTTCTCAGTGTCTAATTGGAAAAAATGAAGTGATATATAATGCTTCCCTGGGAACTTGTTTGGCATGGAAGAGGCTACACAATGCAAAGGCACTTATAGTGTTTGATAATGTTGTTAAGGATGGACAACTACAAATGTTTACAGGGAATAGAGACTCTCTGTTACGTGAATGCCTAGGTGGGGGGAGCAGAATCATCATAATTTCTAGGGATGAACATATATTGAAGACACATGAAGTAGATGATGTTTACAAAATCCCATTGTTGGATAAAAAAGAAGCTGTTAAGTTGTTTTGCATAAATGCTTTCAAACATAATTATATTATGCATGGTTATGAATGGCTTATAAATGATATACTGTCACATGCTGAAGGCCATCCCTTAGCAATTAAGGTAGTAGGCTCATCTTTGTTTGGCCGAAGTGTCTCACAATGGAGAAGTGCATTGGCTAAGCTACGAGAACATAAAAGTAAAGGTATTATGGATGTGCTGCGAATAGGGTTTGATGATTTGGACTACTTTGAAAAGGAAATATTTCTGGATATTGCTTGTTTCTTCAACAAATTTGAAGTGCAATCTGTAAAGGAAATTTTAGATTTCCGTGGATTTTATCCTGAAGATGGCCTTCAAGTTCTCATTGACAAATCACTCATAACCCTTAAATATGGGATGACTGTTAATATGCATGGCTTATTGATAGATTTCGCCAGGTGTATTGTTCAAGAAAAATCACCTAAAGAGCCATGCAATTGGAGCAGATTGTGGGAGTACCAAGATCTCCACAAAATTATGTCAAATAATATGGCAGCAGAGAAACTTGAAGCCATCGCTGTTGAATATAAATCATATAAGGAGGAGTTTCATGAAACAATCATAAGGGTCGATGCTTTATCAAAAATGAGTCACCTTAAGTTGCTCAAACTTAAGAATGTGACTTTTTCCGGAAGCCTCGATCATCTTTCCAATGAGTTAGGATATCTTGCTTGGGATAAATATCCTTTTGGGTGTTTGCCTCCAAGTTTTCAGCCGAGCAAACTTGTTGAGTTGTGCCTGAGTCACAGCAACATCAAACATCTATGGAAAGACAAAAAGCCTCTACACAATTTGAGACATTTGGATCTCTCTCATTCCAAAACACTAATCGAGTTGCCAGATTTTGGGGAGGCCCTAAATCTTGAGTGCCTAAATTTGCACGGATGTATAAAACTCAAGAATATTCATTCATCCATTGGTCTTCTAAGAAAGCTGACTTTTTTGAATTTGGAAGAGTGCAGAAGTCTTGTTGAGTTACCACATTTCAAAGAGGACCTAAATCTTGAAATACTAAATCTTGAAGGATGTATACAGCTCAAGCAAATCAATCCATGCGTCGGTCTTCTAAGAGAGCTTAGAATTTTGAATTTGAAAGACTGCAAAAGTCTAGTAAGCTTACCCAACAGCATATTGTGCCTCAATTCTCTTGAGTATTTGAATCTATATGGCTGTTCAGAACTGTATAATACCCGGTTATTAAAAGAACCAAGGGATGCAGATCATTTGAAGAAGCTTTGTATAGGTGAAGCTACTGATTCCAAATCAATATCCTCCATATTGAAAAGGTGGTTTATGTGGCCTTTACATTTGTGGTATTCCAGAGCACATGAAGATTCATCAGTTGGTTATCTGTTGCCTTCATCGCTTACTATCCCATGTATGTGTCGACTTGATCTAAGTTATTGCAATTTAGTTCAAATCCCCGATGCTATTGGAAATTTACATTGCTTAGAAAGCCTAAATTTAAGGGGAAACAATTTTGCCACACTGCCTAACCTCAGGGAGCTTTCCAAACTGCGTTACTTAAACTTAGAGCATTGCAAGCAGTTGGAATATTTGCCTGAGCTCCCTTCACCAACTGACATGTCATACGATGCTATTTGGACATCGCTGCCAATGCCAGCATTTCCACCTCTAGCTTGGGGAAGTTGGCCAAGTTCAATTATAAATATTGATAAAACAGTAACAGAATCAGGATTAAATATTTTCAACTGCCCAGAATTAGTTGAGAGGAAAGGCTGCCTTAGCATGGGTTTGTCATGGATGATACAACTTGTTCAGGGGAACTACCAATGCGGATATGAGTTGTTGTGTGATTGGCCTCCAAAGATTTCAAGTATTGTTCCAGGAAGTGAAATATCAGTATTCGCTGTTCATTCTGGAAGAGAAACAAATTTAGAGATGGGTCCTCCAAAAAGAAAACCATTTGGTTATCGTGATGTTATGATTCCGGTGGATCTGCATGAAGATGTAGTCATGGACAAATCAGATCACATGTGGTTATTCTATTACGATCCATATAAAGTATTCGATCGACCCTTGGACTGGAAATTGGAAATTGATATAAAGGACAGGCAAGGTTTTCATTTTGAGGTGAAGAAATACGGGTATCGTTGGGTATATGAACAGGATCTAGAATCAGGAAGAGGAAAAGGGGAACTCATGAATAATATGAATAAGCTTGCTAGAATAAAGTGA 3333 0.3813 MASKAIIQCNSSSSHVMRTYDVFVSFRGEDTRNNITDLLLGTLGSKGIDVFKDNEDLRKGESIAPELLQAIQGSRIFVVVFSKNYASSTWCLHELAHICNCIETSERSVLPIFYDVDPSDVRKQSGCYEKAFAEYEERFRQDKEKMEEVKTWREALTKVANHGGWDIRNKPLYTETEQIVRKITNMLGHKFSSLPKDNLVGMESRVKELVKCLCLGSANDVRVVGISGMSGIGKTTLARALYEKIFDKFDFHCLIDDVSKIYQDSGALGVQKQLLSQCLIGKNEVIYNASLGTCLAWKRLHNAKALIVFDNVVKDGQLQMFTGNRDSLLRECLGGGSRIIIISRDEHILKTHEVDDVYKIPLLDKKEAVKLFCINAFKHNYIMHGYEWLINDILSHAEGHPLAIKVVGSSLFGRSVSQWRSALAKLREHKSKGIMDVLRIGFDDLDYFEKEIFLDIACFFNKFEVQSVKEILDFRGFYPEDGLQVLIDKSLITLKYGMTVNMHGLLIDFARCIVQEKSPKEPCNWSRLWEYQDLHKIMSNNMAAEKLEAIAVEYKSYKEEFHETIIRVDALSKMSHLKLLKLKNVTFSGSLDHLSNELGYLAWDKYPFGCLPPSFQPSKLVELCLSHSNIKHLWKDKKPLHNLRHLDLSHSKTLIELPDFGEALNLECLNLHGCIKLKNIHSSIGLLRKLTFLNLEECRSLVELPHFKEDLNLEILNLEGCIQLKQINPCVGLLRELRILNLKDCKSLVSLPNSILCLNSLEYLNLYGCSELYNTRLLKEPRDADHLKKLCIGEATDSKSISSILKRWFMWPLHLWYSRAHEDSSVGYLLPSSLTIPCMCRLDLSYCNLVQIPDAIGNLHCLESLNLRGNNFATLPNLRELSKLRYLNLEHCKQLEYLPELPSPTDMSYDAIWTSLPMPAFPPLAWGSWPSSIINIDKTVTESGLNIFNCPELVERKGCLSMGLSWMIQLVQGNYQCGYELLCDWPPKISSIVPGSEISVFAVHSGRETNLEMGPPKRKPFGYRDVMIPVDLHEDVVMDKSDHMWLFYYDPYKVFDRPLDWKLEIDIKDRQGFHFEVKKYGYRWVYEQDLESGRGKGELMNNMNKLARIK 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00931 1110 Gene3D Ribonuclease Inhibitor 562 710 IPR032675 -
Pumo11g00931 1110 Gene3D Ribonuclease Inhibitor 711 798 IPR032675 -
Pumo11g00931 1110 Coils Coil 540 560 - -
Pumo11g00931 1110 Gene3D - 190 357 IPR027417 -
Pumo11g00931 1110 SMART till_3 19 162 IPR000157 GO:0007165
Pumo11g00931 1110 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 707 IPR044974 GO:0006952
Pumo11g00931 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 456 IPR027417 -
Pumo11g00931 1110 Gene3D - 17 189 IPR035897 -
Pumo11g00931 1110 Gene3D Ribonuclease Inhibitor 816 908 IPR032675 -
Pumo11g00931 1110 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 165 IPR035897 -
Pumo11g00931 1110 SUPERFAMILY L domain-like 566 904 - -
Pumo11g00931 1110 PRINTS Disease resistance protein signature 223 238 - -
Pumo11g00931 1110 PRINTS Disease resistance protein signature 299 313 - -
Pumo11g00931 1110 PRINTS Disease resistance protein signature 879 895 - -
Pumo11g00931 1110 PRINTS Disease resistance protein signature 397 411 - -
Pumo11g00931 1110 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 192 - -
Pumo11g00931 1110 Pfam NB-ARC domain 204 432 IPR002182 GO:0043531
Pumo11g00931 1110 ProSiteProfiles Leucine-rich repeat profile. 861 882 IPR001611 GO:0005515
Pumo11g00931 1110 SUPERFAMILY "Winged helix" DNA-binding domain 434 537 IPR036390 -
Pumo11g00931 1110 Gene3D - 362 446 IPR042197 -
Pumo11g00931 1110 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Pumo11g00931 1110 Pfam TIR domain 20 193 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00931 Pumo-Chr11 34183713 34188738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00931 18 772 WRKY Transcription Factor Family AT4G12020 29.887 3.28e-80 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00931 - - gmx:100790778 1498.03