Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00929 ATGCAGGACACCGGCATTCTTGGTGCTGAAAGTCACCCCCTCCATTTGCATGGCTTGAACTTCTTTGTTGTTGGTCAAGGTTTTGGTAACTTTGACCCAAATAAGGACCCTGCAAACTTCAATCTTGTTGATCATGTTGAAAGGAACACAGTTGGTGTTCCATCTGGTGGATGGGTTGCAATCAGATTCCTAGCTGATAATCCAGGGGTATGGTTCATGCATTGCCATCTTGAAGTCCACACCAGCTGGGGTCTGAAAATGGCCTGGATTGTGTTGGATGGAAAACTTCCAAATCAGAAGCTGCTTCCACCACCAGCTGATCCTCCAAATTGTGAGATTGTTGGAGAAGTGACAGGGGTGGGAAGCAAAGTGGATAAGTTCAAGGTTGGAGACAAGGTGGCTGTGGGAGTCTTGGTTGGGTCCTGCCACTCATGCCAAAACCGTGTCAACAATCTTGAGAATTACTGCCAACAAGGGATTCCCACATATGGTGCCAAGTATGTGGATGGCACCATCACATATGGGGGATTCTTTGACTTCATGGTTGCAGATGAGCACTTTGTTTTCAACATTCCAAGTGGCCTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCAGGGATCACAGTAGACCAAGATCAAATGCAGGCTGCAATGGGCACCTTGGATGGTATAATTGATACTGTTTATGCAGTCCATCCTATCATGCCTTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAACGGTTGGGGCACCAGAAAAGCCTCTGGAGTTGCTACTCCCACCTTTAATTATGGGGAGAAAAAGTATAGCTGGTAGTTACATTGGAGGAATCAAGGAGACACAAGAAATGATTGATTTTGCTGCTGAACACAATGTTAGACCAGAAATTGAGGTAATTCCTATGGATTATGTGAACACAGCGATGGAACATCTCCAAAAGGTTAGGTCTTCAATGTATCCCGTGCCTCAGCGTGCTCACAGTGGGGGAGGAGTGAGGAATATCTTGGCTATTAGATTAGACAATGAAAATTCCCCAGGGACCCTGTCAGAATTGCAACTAAGTTTTGTTGACTTTGATTTTGGGGATTTATGGGTCGATAATCATTATGCTTGGTCAGAATCTTTAATTATTTTCCAACCTAGCCTTGTGTTTGTGCATTGTGAAGAATTAGAAAGGTTAGAGGCAAAGTCAGGACTCTTTCTTTATGGAACATATCAATATCCACCTATTGATGTTGTTACCACTTGGGAAAAAACTCATGGTGTATATCTTCCTTCTGGTTTACACAAGGCAGGGATGGAAATATCATCTGAATAG 1326 0.4374 MQDTGILGAESHPLHLHGLNFFVVGQGFGNFDPNKDPANFNLVDHVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVLDGKLPNQKLLPPPADPPNCEIVGEVTGVGSKVDKFKVGDKVAVGVLVGSCHSCQNRVNNLENYCQQGIPTYGAKYVDGTITYGGFFDFMVADEHFVFNIPSGLPLDAAAPLLCAGITVDQDQMQAAMGTLDGIIDTVYAVHPIMPLIDLLKSHGKLVTVGAPEKPLELLLPPLIMGRKSIAGSYIGGIKETQEMIDFAAEHNVRPEIEVIPMDYVNTAMEHLQKVRSSMYPVPQRAHSGGGVRNILAIRLDNENSPGTLSELQLSFVDFDFGDLWVDNHYAWSESLIIFQPSLVFVHCEELERLEAKSGLFLYGTYQYPPIDVVTTWEKTHGVYLPSGLHKAGMEISSE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00929 441 FunFam Putative cinnamyl alcohol dehydrogenase 6 216 297 - -
Pumo11g00929 441 Gene3D - 1 112 IPR008972 -
Pumo11g00929 441 SUPERFAMILY Cupredoxins 9 110 IPR008972 -
Pumo11g00929 441 Gene3D - 212 297 - -
Pumo11g00929 441 Pfam Alcohol dehydrogenase GroES-like domain 112 190 IPR013154 -
Pumo11g00929 441 Pfam Multicopper oxidase 11 93 IPR011706 GO:0005507|GO:0016491
Pumo11g00929 441 ProSitePatterns Multicopper oxidases signature 2. 74 85 IPR002355 GO:0005507
Pumo11g00929 441 ProSitePatterns Multicopper oxidases signature 1. 69 89 IPR033138 -
Pumo11g00929 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 295 IPR036291 -
Pumo11g00929 441 Gene3D - 298 317 - -
Pumo11g00929 441 Gene3D - 113 205 - -
Pumo11g00929 441 SUPERFAMILY GroES-like 75 211 IPR011032 -
Pumo11g00929 441 PANTHER ALDEHYDE REDUCTASE 211 317 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00929 Pumo-Chr11 33602116 33614156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00929 75 316 Monolignol Biosynthesis Gene Families AT4G37990 43.871 3.72e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00929 K05909 - tcc:18594769 224.942