Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00901 ATGTTTATTGTAATGTCAGGTCTGCGCAATCTGGTTAGTAGAACCTTTGGTCTTAGAGAGTCAAGTTTTATGTCTGAACTAGACGCACAAATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAATATGTGCATATTCGCGTACAGCAGCGAAATGGTAGGAAAAGTCTGACAACCGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAGTTCTGTTGCAATGGAACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACCTTCCTGGTCCAGGCTGGTATCGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTGA 411 0.4209 MFIVMSGLRNLVSRTFGLRESSFMSELDAQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00901 136 SUPERFAMILY eIF1-like 23 136 IPR036877 GO:0003743|GO:0006413
Pumo11g00901 136 FunFam Eukaryotic translation initiation factor SUI1 25 136 - -
Pumo11g00901 136 CDD eIF1_SUI1 52 135 IPR005874 GO:0003743
Pumo11g00901 136 ProSiteProfiles Translation initiation factor SUI1 family profile. 54 124 IPR001950 GO:0003743|GO:0006413
Pumo11g00901 136 Gene3D - 16 136 - -
Pumo11g00901 136 PIRSF Transl_init_SUI1_Euk 23 136 IPR005874 GO:0003743
Pumo11g00901 136 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 29 136 - -
Pumo11g00901 136 NCBIfam translation initiation factor SUI1 29 136 IPR005874 GO:0003743
Pumo11g00901 136 Pfam Translation initiation factor SUI1 51 125 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00901 Pumo-Chr11 33068343 33070416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00901 24 136 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 5.18e-75 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00901 K03113 - pcin:129312453 244.588