Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00888 ATGCCTCCTTTAAAACCTCCTCCAGGCAGGCTAAACCCTCTTCCTCCTGAGCCACCTTCATTTAGGCCTTCTGGTGATGCTGCTCCGGCTGCTACTGCTGCTGTTGCTGCAGCTCCTCGTCCTGCCCCTCAACAGCCTGCTATTAGTAGCACTCCACCACCACCCCGACCACCAGCTGGTGCCAAACCTGGCCCACCTCTACCACTACCGCCAGCACTAGCTGGTGCCAGACCTGGTCCTCCTCCTCCACCACCTCCAGCAACAGTTGGTGCCAAACCTGGTCCTCCTCCACCACCACCCCCAGCTCCAGCTGGTGCCAAATCTGGTCCTCCTCCACCACCACCCCCAGCACCAGCTGGTGCCAAACCTGGTCCTCGTCCACCACCACCTCCTATGAGTGGTGTGGCTCCTCCTCGACCTCCGCCCCCATTTGGCTCAAAGGTGCCACGGCCTTTAGCTAGTGGATCAAAAGCTACAGTTGGAGTAGAAGGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCGGATCAATCAATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTCAAAAACAGAAACAGTCTTCTTCCCAAGATCCTTCACCTCAGTTTGTCCAGATCATTGACAAAAGGAAAGCGCAAAATTTATTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGACATGAGCTGCCCCCAGAATTCCTTCAAACCTTGCTGAAGATGGCACCGACATCAGATGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATCTATCGCAACTTGGGCCTGCTGACCGTTTCCTAAAAGCCATGGTTGACATTCCATTTGCATTTAAGCGAATGGAAGCTCTGCTTTTCATCGGCTCAATTAAAGAGGAGCTTGCAACTACTATGGAGTCTTTTGCTATTCTAGAGGTTGCTTGTAAGGAACTAAGAAGTAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTCTGAAATTATCCGATGTAAAAGGAACAGACGGCAAGACTACACTCTTACATTTTGTTGTTCTAGAGATTATCCGCTCTGAGGGCATAAAAGCCATCCGAAAGGCGAAAGAGAACCAGAGTATTAAATCGGATGACATGCACGATAGTAATCAAGAAACAGAAGATCGCTACCATGAAATCGGTCTTCAGGTGGTTTCACGCTTGAGCAGTGAACTTGAGAATGTAAAAAAAGCAGCAGTTATAGATGCTGACAGCTTAACAGGAACCACTGCCAAACTTGGCCATGGTCTCATAAAAACACGAGACTTGGTAAACAAAAGCATGAAGAATGTGGAGGAAGATAGGGGGTTTTGTGAGACAGTGAAAAGTTTTGTGCAGAATGCTGAGGCTGATGTTATGAAACTGCTGGAAGAGGAGAAGAAAATCATGGCTTTGGTGAAGAGCACTGGTGATTACTTTCATGGGAATGCTGGGAAGGATGAAGGCACAAGGTTGTTCATAGTAGTACGAGACTTTTTAATAATGCTGGATAAGGTATGCAAGGAGGTGAGAGATACACAGAAGAAGCCGGCAAAAACTCTAAAACAAGAGACTCCTCGAGGAGCATCTTCCTCTGAAACACGTCCACCACCCGATTTTCGTCAGCGGCTTTTTCCAGCAACTTGCTGA 1836 0.4711 MPPLKPPPGRLNPLPPEPPSFRPSGDAAPAATAAVAAAPRPAPQQPAISSTPPPPRPPAGAKPGPPLPLPPALAGARPGPPPPPPPATVGAKPGPPPPPPPAPAGAKSGPPPPPPPAPAGAKPGPRPPPPPMSGVAPPRPPPPFGSKVPRPLASGSKATVGVEGEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQKQKQSSSQDPSPQFVQIIDKRKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKAMVDIPFAFKRMEALLFIGSIKEELATTMESFAILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAIRKAKENQSIKSDDMHDSNQETEDRYHEIGLQVVSRLSSELENVKKAAVIDADSLTGTTAKLGHGLIKTRDLVNKSMKNVEEDRGFCETVKSFVQNAEADVMKLLEEEKKIMALVKSTGDYFHGNAGKDEGTRLFIVVRDFLIMLDKVCKEVRDTQKKPAKTLKQETPRGASSSETRPPPDFRQRLFPATC 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00888 611 Pfam Formin Homology 2 Domain 165 565 IPR015425 -
Pumo11g00888 611 MobiDBLite consensus disorder prediction 576 611 - -
Pumo11g00888 611 PANTHER FORMIN-RELATED 34 589 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo11g00888 611 SMART it6_source 163 580 IPR015425 -
Pumo11g00888 611 Gene3D Formin, FH2 domain 168 597 IPR042201 -
Pumo11g00888 611 MobiDBLite consensus disorder prediction 45 148 - -
Pumo11g00888 611 SUPERFAMILY Formin homology 2 domain (FH2 domain) 233 592 - -
Pumo11g00888 611 MobiDBLite consensus disorder prediction 1 23 - -
Pumo11g00888 611 MobiDBLite consensus disorder prediction 1 167 - -
Pumo11g00888 611 ProSiteProfiles Formin homology-2 (FH2) domain profile. 163 591 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00888 Pumo-Chr11 32808674 32813345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00888 167 609 FH2 protein (formin) Gene Family AT5G54650 67.406 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00888 - - gmx:100776210 841.262